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Status
Public on Jan 01, 2007
Title
Bthetaiotaomicron/Blongum_NMRIcecum_Stdchow_10d_#8436
Sample type
RNA
Source name
Bacteroides thetaiotaomicron and Bifidobacterium longum bi-association, cecum NMRI mice, 10days
Organisms
Bacteroides thetaiotaomicron ; Bifidobacterium longum Characteristics
Bacteroides thetaiotaomicron and Bifdobacterium longum bi-association, cecum NMRI mice, 10days
Extracted molecule
total RNA
Label
biotin
Description
Bacteroides thetaiotaomicron and Bifidobacterium longum bi-associated in gnotobiotic NMRI mice on a standard polysaccharide-rich diet, harvested from the cecum after 10 days.
Data processing
MAS5; scaling = 500
Submission date
Sep 18, 2006
Last update date
Sep 19, 2006
Contact name
Justin L. Sonnenburg
E-mail(s)
[email protected] Phone
314-362-5443
URL
http://gordonlab.wustl.edu/metaview/bt Organization name
Washington University
Department
Center for Genome Sciences
Lab
Jeffrey I. Gordon
Street address
4444 Forest Park
City
Saint Louis
State/province
MO
ZIP/Postal code
63108
Country
USA
Platform ID
GPL1821 Series (2)
GSE5865 B.thetaiotaomicron or B. longum mono-association versus B. thetaiotaomicron/B. longum co-colonization, PR chow, NMRI
GSE5869 B. thetaiotaomicron or B. longum mono-association vs. bi-association
Data table header descriptions ID_REF VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE SusA_at
1900.3
P
.001183
SusB_at
5468.6
P
.000737
SusC_at
11937
P
.000737
SusD_at
5285.2
P
.000737
SusE_at
3991.2
P
.000936
SusF_at
5141.4
P
.000737
SusG_at
2157.2
P
.032015
SusR_at
1301.2
P
.000737
BT0001_at
272.4
A
.172724
BT0002_at
158.3
A
.513937
BT0003_at
70.8
A
.789211
BT0004_at
21.7
A
.844552
BT0005_at
320.2
A
.376576
BT0006_at
18.6
A
.933521
BT0007_at
57.7
A
.210789
BT0008_at
1918.8
P
.001488
BT0009_at
249.6
A
.458256
BT0010_at
66.1
A
.949737
BT0011_at
33.1
A
.913523
BT0012_at
244.1
A
.172724
6601 176 Kbytes .Supplementary data files not provided
