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Sample GSM136957 Query DataSets for GSM136957
Status Public on Sep 22, 2006
Title A549 cell line – exposure 1 Cobalt 2mM – 4h - replicate1
Sample type RNA
 
Channel 1
Source name A549 cell line – 2mM Cobalt – 4h
Organism Homo sapiens
Characteristics Cobalt sample from A549 cells
Extracted molecule total RNA
Label Cy3
 
Channel 2
Source name A549 cell line – 0mM Cobalt – 4h
Organism Homo sapiens
Characteristics Control sample from A549 cells
Extracted molecule total RNA
Label Cy5
 
 
Description Control sample from A549 cells was labelled in Cy5 and hybridized against Cobalt sample labelled in Cy3
Data processing Ratios (test/control) were normalized towards the mean ratio of the microarray then converted to base-2 logarithms
 
Submission date Sep 21, 2006
Last update date Sep 21, 2006
Contact name Bérenguer Frédéric
E-mail(s) [email protected]
Organization name CEA/DSV
Department SBTN
Street address BP17171
City bagnols sur ceze
ZIP/Postal code 30207
Country France
 
Platform ID GPL4263
Series (1)
GSE5892 Gene expression profile of human lung cell line (A549) treated with 2mM 59cobalt chloride during 30mn, 2h, 4h and 24h

Data table header descriptions
ID_REF
VALUE log2-transformed normalized ratio (test/control)
F635 Median - B635 Median feature pixel intensity of 635 after local subtraction of background
F532 Median - B532 Median feature pixel intensity of 532 after local subtraction of background
Flags Flags indicating the quality of scanner quantification
Ratio (635/532) Normalized ratio (635/532)

Data table
ID_REF VALUE F635 Median - B635 F532 Median - B532 Flags Ratio (635/532)
1.1.1 -196 3 -100 -65.3333333333333
1.2.1 1.28379 23 56 0 0.410714285714286
1.3.1 -0.597752 5212 3444 0 1.51335656213705
1.4.1 -2.44746 60 11 0 5.45454545454545
1.5.1 -1.03263 313 153 0 2.04575163398693
1.6.1 -1.20547 113 49 0 2.30612244897959
1.7.1 -0.985184 4553 2300 0 1.9795652173913
1.8.1 -0.729911 408 246 0 1.65853658536585
1.9.1 -1.84629 169 47 0 3.59574468085106
1.10.1 -49 -14 -100 3.5
1.11.1 147 -21 -100 -7
1.12.1 -0.722314 947 574 0 1.64982578397213
1.13.1 -0.838891 4833 2702 0 1.78867505551443
1.14.1 -0.77354 506 296 0 1.70945945945946
1.15.1 -0.633218 76 49 0 1.55102040816327
1.16.1 -0.959427 1157 595 0 1.94453781512605
1.1.2 -3.13124 368 42 0 8.76190476190476
1.2.2 -0.508934 4195 2948 0 1.4229986431479
1.3.2 0.318353 3232 4030 0 0.801985111662531
1.4.2 -127 43 -100 -2.95348837209302

Total number of rows: 8960

Table truncated, full table size 378 Kbytes.




Supplementary data files not provided

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