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Sample GSM136958 Query DataSets for GSM136958
Status Public on Sep 22, 2006
Title A549 cell line – exposure 2 Cobalt 2mM – 4h
Sample type RNA
 
Channel 1
Source name A549 cell line – 0mM Cobalt – 4h
Organism Homo sapiens
Characteristics Control sample from A549 cells
Extracted molecule total RNA
Label Cy3
 
Channel 2
Source name A549 cell line – 2mM Cobalt – 4h
Organism Homo sapiens
Characteristics Cobalt sample from A549 cells
Extracted molecule total RNA
Label Cy5
 
 
Description Control sample from A549 cells was labelled in Cy3 and hybridized against Cobalt sample labelled in Cy5
Data processing Ratios (test/control) were normalized towards the mean ratio of the microarray then converted to base-2 logarithms
 
Submission date Sep 21, 2006
Last update date Sep 21, 2006
Contact name Bérenguer Frédéric
E-mail(s) [email protected]
Organization name CEA/DSV
Department SBTN
Street address BP17171
City bagnols sur ceze
ZIP/Postal code 30207
Country France
 
Platform ID GPL4263
Series (1)
GSE5892 Gene expression profile of human lung cell line (A549) treated with 2mM 59cobalt chloride during 30mn, 2h, 4h and 24h

Data table header descriptions
ID_REF
VALUE log2-transformed normalized ratio (test/control)
F635 Median - B635 Median feature pixel intensity of 635 after local subtraction of background
F532 Median - B532 Median feature pixel intensity of 532 after local subtraction of background
Flags Flags indicating the quality of scanner quantification
Ratio (635/532) Normalized ratio (635/532)

Data table
ID_REF VALUE F635 Median - B635 F532 Median - B532 Flags Ratio (635/532)
1.1.1 2.60090404459018 91 15 0 6.06666666666667
1.2.1 -30 9 -100 -3.33333333333333
1.3.1 -2.83007499855769 198 1408 0 0.140625
1.4.1 -30 -2 -100 15
1.5.1 -0.139403056665416 69 76 0 0.907894736842105
1.6.1 3.77258950389693 82 6 0 13.6666666666667
1.7.1 -0.0162944474504022 2201 2226 0 0.988769092542677
1.8.1 -0.572889668420581 80 119 0 0.672268907563025
1.9.1 0.652076696579693 22 14 0 1.57142857142857
1.10.1 1.1926450779424 16 7 0 2.28571428571429
1.11.1 0.321928094887362 5 4 0 1.25
1.12.1 -2.06761090615468 99 415 0 0.23855421686747
1.13.1 -1.00583694002228 740 1486 0 0.497981157469717
1.14.1 -4.64385618977472 5 125 0 0.04
1.15.1 4.24792751344359 19 1 0 19
1.16.1 -0.743124387044982 187 313 0 0.597444089456869
1.1.2 -13 21 -100 -0.619047619047619
1.2.2 -1.27462238010901 558 1350 0 0.413333333333333
1.3.2 -1.3887170786528 726 1901 0 0.381904260915308
1.4.2 3.97727992349992 63 4 0 15.75

Total number of rows: 8960

Table truncated, full table size 420 Kbytes.




Supplementary data files not provided

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