NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1370759 Query DataSets for GSM1370759
Status Public on May 01, 2015
Title 211At_cortex_1.7kBq_6h_#3
Sample type RNA
 
Source name Mouse kidney cortex, 1.7 kBq, 6h
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: kidney cortex
injected activity: 1.7 kBq
time point: 6h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) [email protected]
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1880.66 0
ILMN_2721178 655.7986 0
ILMN_3033922 956.6802 0
ILMN_3092673 4904.607 0
ILMN_2816356 112.0397 0.1578947
ILMN_2808939 380.648 0
ILMN_2634564 467.3391 0
ILMN_2737647 119.8449 0.04761905
ILMN_2734484 673.6624 0
ILMN_2952292 145.5944 0
ILMN_2699078 107.8698 0.3358396
ILMN_1213681 322.5975 0
ILMN_2735413 229.6611 0
ILMN_2735415 301.2849 0
ILMN_2891688 1107.697 0
ILMN_2637698 781.3339 0
ILMN_2674228 194.1501 0
ILMN_2601546 111.4835 0.1766917
ILMN_1230831 109.0145 0.2681704
ILMN_2848071 524.7374 0

Total number of rows: 25697

Table truncated, full table size 722 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap