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Sample GSM1370822 Query DataSets for GSM1370822
Status Public on May 01, 2015
Title 211At_spleen_1.7kBq_6h_#2
Sample type RNA
 
Source name Mouse spleen, 1.7 kBq, 6h
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: spleen
injected activity: 1.7 kBq
time point: 6h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) [email protected]
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1385.984 0
ILMN_2721178 333.2878 0
ILMN_3033922 304.5782 0.001253133
ILMN_3092673 1994.76 0
ILMN_2816356 114.0067 0.1002506
ILMN_2808939 543.986 0
ILMN_2634564 343.4239 0
ILMN_2737647 99.09602 0.9010025
ILMN_2734484 303.9354 0.001253133
ILMN_2952292 134.8104 0.006265664
ILMN_2699078 104.8266 0.5676692
ILMN_1213681 167.5764 0.001253133
ILMN_2735413 103.79 0.622807
ILMN_2735415 97.58292 0.9423559
ILMN_2891688 877.6959 0
ILMN_2637698 1110.127 0
ILMN_2674228 247.2318 0.001253133
ILMN_2601546 118.1831 0.05012531
ILMN_1230831 104.3464 0.6015037
ILMN_2848071 114.4772 0.09398496

Total number of rows: 25697

Table truncated, full table size 774 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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