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Sample GSM137744 Query DataSets for GSM137744
Status Public on Oct 03, 2006
Title PM-6
Sample type RNA
 
Source name experimental group: photoperiod-advanced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 6223
year: 2003
experimental group: photoperiod-advanced ovulation
normalYSR-eyed-malfo: 36,4-57-5,33
% of eyed embryos (190degrees.day): 57
% of malfomations at YSR (550degrees.day): 5.3
% of normal alevins at YSR (550degrees.day): 36.4
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) [email protected]
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcbk0048.l.08 0.3750 99.3423 74.7806 0.00321493 76.0334 97.9956 0 0.907049 0
tcbk0023.n.15 1.1010 156.184 157.398 0.00428312 156.184 157.398 0 0.90529 0
tcbi0010.o.09 1.3156 278.711 283.477 0.0016393 285.223 276.941 1 0.925779 0
tcba0006.c.15 1.5000 242.69 195.88 0.00370911 198.63 241.664 1 0.936908 0
tcay0024.j.14 2.6113 383.237 366.258 0.00178521 367.124 384.238 1 0.944483 0
tcay0002.m.19 1.1448 235.13 190.893 0.0029143 191.633 235.379 1 0.939148 0
tcac0006.k.10 2.2620 409.679 408.998 0.001481 409.679 408.998 1 0.928198 0
1RT152N02_D_G01 2.7129 442.567 423.276 0.00140103 425.25 443.142 1 0.958958 0
1RT118G08_C_D04 2.7633 418.127 425.913 -9.53904e-05 425.635 417.162 1 0.932946 0
1RT85F03_B_C02 2.6474 144.95 156.266 0.0015675 155.114 145.284 0 0.914551 0
1RT55O11_A_H06 0.5425 73.6489 134.898 0.00221563 107.457 96.5246 0 0.836049 0
CVU03687 8.5596 357.367 340.181 0.00132094 342.744 356.283 1 0.951295 0
tcbk0048.l.15 0.3885 100.046 89.135 0.00221563 150.377 62.4057 0 0.755699 0
tcbk0023.o.12 6.1085 892.147 993.983 -0.00385861 987.455 891.968 1 0.926473 0
tcbi0010.o.16 0.4917 111.777 143.787 0.00221563 170.16 102.427 0 0.898865 0
tcba0006.d.08 0.6431 107.726 157.467 0.00221563 165.002 113.481 0 0.871155 0
tcay0024.k.20 1.1881 190.76 190.043 0.0037404 190.76 190.043 1 0.933001 0
tcay0002.n.01 0.5630 65.0197 84.8987 0.00221563 96.8257 57.8227 0 0.85606 0
tcac0006.k.23 1.2178 222.124 243.598 0.00176761 243.966 222.234 1 0.948671 0
1RT152O08_C_H04 1.5571 145.353 103.296 0.00434233 105.44 146.317 1 0.926472 0

Total number of rows: 9216

Table truncated, full table size 694 Kbytes.




Supplementary data files not provided
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