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Sample GSM137747 Query DataSets for GSM137747
Status Public on Oct 03, 2006
Title PM-2
Sample type RNA
 
Source name experimental group: photoperiod-advanced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 5831
year: 2003
experimental group: photoperiod-advanced ovulation
normalYSR-eyed-malfo: 0,5-6-50
% of eyed embryos (190degrees.day): 6
% of malfomations at YSR (550degrees.day): 50
% of normal alevins at YSR (550degrees.day): 0.5
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) [email protected]
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcbk0048.l.08 0.3356 140.428 110.15 0.00304844 111.64 139.477 1 0.940399 0
tcbk0023.n.15 0.9735 218.901 126.132 0.00668727 129.192 220.906 1 0.926653 0
tcbi0010.o.09 1.0735 385.054 367.107 0.00306368 367.154 385.706 1 0.918632 0
tcba0006.c.15 1.2042 340.584 339.816 0.00359674 340.584 339.816 1 0.934142 0
tcay0024.j.14 2.5057 619.655 617.253 0.00102939 619.655 617.253 1 0.891047 0
tcay0002.m.19 1.1860 388.075 312.306 0.00597966 315.298 385.724 1 0.957811 0
tcac0006.k.10 2.9583 890.582 850.933 0.00162108 856.189 890.678 1 0.902403 0
1RT152N02_D_G01 2.7382 733.819 617.014 0.00452307 618.794 736.709 1 0.938442 0
1RT118G08_C_D04 3.2682 839.975 769.071 -0.000190789 772.19 842.087 1 0.939049 0
1RT85F03_B_C02 2.7958 275.045 219.937 0.00523308 219.695 276.368 1 0.948385 0
1RT55O11_A_H06 0.6752 153.159 81.4709 0.00772637 80.7952 157.54 0 0.928717 0
CVU03687 0 657.272 550.494 0.00239973 554.799 658.711 1 0.907586 0
tcbk0048.l.15 0.3061 121.077 30.7811 0.00568224 31.1109 122.373 0 0.885892 0
tcbk0023.o.12 4.9236 1136.3 1046.44 -0.00337244 1050.73 1140.67 1 0.924822 0
tcbi0010.o.16 0.3968 139.919 178.034 0.00273468 213.391 125.942 0 0.915426 0
tcba0006.d.08 0.5775 162.169 260.09 0.00273468 241.059 185.561 0 0.894759 0
tcay0024.k.20 1.0744 292.659 236.429 0.00420945 239.256 293.159 1 0.941966 0
tcay0002.n.01 0.5244 104.718 127.309 0.00273468 165.728 87.8527 0 0.870467 0
tcac0006.k.23 1.3945 446.253 477.187 0.00250366 475.257 446.454 1 0.963269 0
1RT152O08_C_H04 1.6708 293.542 232.369 0.00718463 234.914 295.673 1 0.937732 0

Total number of rows: 9216

Table truncated, full table size 697 Kbytes.




Supplementary data files not provided
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