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Sample GSM137753 Query DataSets for GSM137753
Status Public on Oct 03, 2006
Title HI-5
Sample type RNA
 
Source name experimental group: induced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 6099
year: 2004
experimental group: induced ovulation
normalYSR-eyed-malfo: 39,8-77-3,23
% of eyed embryos (190degrees.day): 77
% of malfomations at YSR (550degrees.day): 3.2
% of normal alevins at YSR (550degrees.day): 39.8
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) [email protected]
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcbk0048.l.08 0.3472 71.5192 33.4798 0.00250675 34.5814 71.2205 0 0.890442 0
tcbk0023.n.15 0.9131 107.436 49.5739 0.00413789 51.0419 108.675 0 0.894731 0
tcbi0010.o.09 1.0718 190.5 179.919 0.00210552 179.696 189.74 1 0.901876 0
tcba0006.c.15 1.0659 149.305 119.559 0.00256018 119.698 148.949 1 0.933183 0
tcay0024.j.14 1.7760 236.219 226.659 0.00180754 225.485 238.098 1 0.937095 0
tcay0002.m.19 0.7787 136.818 107.37 0.0032485 109.716 137.195 0 0.924806 0
tcac0006.k.10 2.2694 357.478 339.878 0.00139031 340.758 355.983 1 0.94827 0
1RT152N02_D_G01 1.9534 271.436 257.033 0.00205567 258.391 270.227 1 0.947244 0
1RT118G08_C_D04 2.3094 310.855 260.842 0.000893411 264.499 311.512 1 0.92955 0
1RT85F03_B_C02 1.9472 102.246 96.1181 0.00246034 96.3238 102.425 0 0.906205 0
1RT55O11_A_H06 0.5032 62.0812 104.202 0.00242892 99.0155 72.1403 0 0.862147 0
CVU03687 0 418.433 426.084 0.000428058 427.379 417.126 1 0.917484 0
tcbk0048.l.15 0.3494 70.1023 146.036 0.00242892 108.488 106.694 0 0.767581 0
tcbk0023.o.12 4.4907 519.335 527.161 0.000353926 529.35 516.145 1 0.874645 0
tcbi0010.o.16 0.4707 86.8461 5.16744 0.00451232 5.00434 88.6386 0 0.895272 0
tcba0006.d.08 0.5674 80.3957 101.864 0.00242892 118.576 70.0831 0 0.866268 0
tcay0024.k.20 0.8678 122.237 87.7424 0.00318978 90.1136 122.496 0 0.919942 0
tcay0002.n.01 0.5786 59.3931 97.2168 0.00242892 90.4997 66.9387 0 0.873814 0
tcac0006.k.23 1.0120 162.061 176.887 0.00208304 177.613 160.242 1 0.912307 0
1RT152O08_C_H04 1.2784 109.679 60.9257 0.003637 62.2605 109.983 0 0.91512 0

Total number of rows: 9216

Table truncated, full table size 692 Kbytes.




Supplementary data files not provided
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