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Sample GSM137758 Query DataSets for GSM137758
Status Public on Oct 03, 2006
Title HI-4
Sample type RNA
 
Source name experimental group: induced ovulation
Organism Oncorhynchus mykiss
Characteristics female: 179
year: 2004
experimental group: induced ovulation
normalYSR-eyed-malfo: 35,6-88-40,91
% of eyed embryos (190degrees.day): 88
% of malfomations at YSR (550degrees.day): 40.9
% of normal alevins at YSR (550degrees.day): 35.6
Extracted molecule total RNA
Label P33
 
Description unfertilized eggs, autumn-spawning strain
Data processing The signal was normalized by the mean signal of the array
 
Submission date Sep 28, 2006
Last update date Oct 02, 2006
Contact name Julien Bobe
E-mail(s) [email protected]
Phone (33) 2 23 48 57 24
Organization name Institut National de la Recherche Agronomique
Lab INRA-SCRIBE
Street address Campus de Beaulieu
City Rennes
ZIP/Postal code 35000
Country France
 
Platform ID GPL3650
Series (1)
GSE5928 Egg quality after natural and controlled ovulation

Data table header descriptions
ID_REF
VALUE mandatory...image signal intensity constant diameter
QIM_CONST image signal intensity constant diameter
QFIT_VAR fit signal intensity varariable diameter
FIT_CORR fot correction
QIM_VAR image signal intensity variable diameter
QFIT_CONST fit signal intensity constant diameter
DIAM variable diameter
SPOT_QUAL spot quality
OVER_CORR overshining correction
QM quality measure

Data table
ID_REF VALUE QIM_CONST QFIT_VAR FIT_CORR QIM_VAR QFIT_CONST DIAM SPOT_QUAL OVER_CORR QM
tcbk0048.l.08 0.3969 68.487 104.283 0.00230265 92.199 72.6445 0 0.880749 0
tcbk0023.n.15 1.3132 99.3997 45.3281 0.00368346 46.5337 98.6373 0 0.900356 0
tcbi0010.o.09 1.3912 187.717 84.923 0.00230265 117.972 135.188 1 0.83255 0
tcba0006.c.15 1.4345 147.041 116.509 0.00258484 118.389 145.84 0 0.928424 0
tcay0024.j.14 2.0781 221.965 221.897 0.00148166 221.965 221.897 1 0.941828 0
tcay0002.m.19 1.0917 144.063 105.849 0.00310471 106.885 144.296 1 0.923498 0
tcac0006.k.10 2.8476 359.391 298.52 0.00157378 302.94 358.855 1 0.917135 0
1RT152N02_D_G01 2.8000 275.623 226.079 0.00269117 227.882 275.99 1 0.935081 0
1RT118G08_C_D04 3.1011 273.994 259.521 0.00158976 262.033 272.461 1 0.921524 0
1RT85F03_B_C02 2.4058 86.1671 46.8085 0.00292234 46.9084 85.6622 0 0.888841 0
1RT55O11_A_H06 0.7717 60.0513 85.3598 0.00230265 87.9923 58.0548 0 0.87817 0
CVU03687 0 216.549 220.409 0.00135456 222.185 215.31 1 0.897504 0
tcbk0048.l.15 0.3918 68.3909 93.8868 0.00230265 102.55 65.1062 0 0.881337 0
tcbk0023.o.12 5.4233 476.349 482.846 -0.00017417 485.044 472.894 1 0.870509 0
tcbi0010.o.16 0.5262 79.4647 12.324 0.00400513 12.2257 81.2893 0 0.910441 0
tcba0006.d.08 0.6767 76.6462 116.526 0.00230265 115.965 82.9904 0 0.852515 0
tcay0024.k.20 1.2862 143.403 143.765 0.00206282 143.403 143.765 1 0.912335 0
tcay0002.n.01 0.5790 45.4294 74.2732 0.00230265 71.3298 49.8931 0 0.85197 0
tcac0006.k.23 1.1948 138.335 129.213 0.00329703 130.393 137.642 0 0.90662 0
1RT152O08_C_H04 1.8846 118.981 75.7438 0.00470188 76.8528 119.296 0 0.907749 0

Total number of rows: 9216

Table truncated, full table size 691 Kbytes.




Supplementary data files not provided
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