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Status
Public on Oct 01, 2007
Title
HighGroup, Line 1, Replicate 1, Male
Sample type
RNA
Source name
Male Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult male flies of the high group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
[email protected] Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5956 Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
13187.0
P
0.0005
1622892_s_at
684.3
P
0.0005
1622893_at
11612.5
P
0.0005
1622894_at
84.3
P
0.0320
1622895_at
186.2
P
0.0078
1622896_at
445.5
P
0.0005
1622897_at
31.5
A
0.4130
1622898_a_at
350.6
P
0.0005
1622899_at
30.1
M
0.0547
1622900_at
13.5
A
0.3888
1622901_at
254.0
P
0.0008
1622902_at
673.5
P
0.0026
1622903_s_at
263.6
P
0.0005
1622904_at
25.1
A
0.4376
1622905_at
2.1
A
0.9211
1622906_at
584.2
P
0.0008
1622907_at
511.3
P
0.0005
1622908_a_at
116.9
P
0.0278
1622909_at
530.9
P
0.0005
1622910_at
24.8
A
0.4376
18769 475 Kbytes .Supplementary data files not provided
