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Status
Public on Oct 01, 2007
Title
low Group, Line 1, Replicate 1, Male
Sample type
RNA
Source name
Male Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult male flies of the low group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
[email protected] Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5956 Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
16735.3
P
0.0005
1622892_s_at
639.1
P
0.0012
1622893_at
10052.2
P
0.0005
1622894_at
116.3
A
0.1227
1622895_at
144.3
P
0.0110
1622896_at
351.9
P
0.0005
1622897_at
12.7
A
0.2968
1622898_a_at
457.7
P
0.0005
1622899_at
5.0
A
0.3888
1622900_at
30.9
P
0.0421
1622901_at
270.3
P
0.0005
1622902_at
501.7
P
0.0177
1622903_s_at
255.3
P
0.0005
1622904_at
46.9
A
0.0789
1622905_at
3.3
A
0.7245
1622906_at
529.5
P
0.0026
1622907_at
493.4
P
0.0006
1622908_a_at
138.8
P
0.0320
1622909_at
516.9
P
0.0006
1622910_at
42.4
A
0.2968
18769 475 Kbytes .Supplementary data files not provided
