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Status
Public on Oct 01, 2007
Title
low Group, Line 2, Replicate 2, Female
Sample type
RNA
Source name
Female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the low group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
[email protected] Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5956 Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
14628.6
P
0.0005
1622892_s_at
443.3
P
0.0006
1622893_at
7099.5
P
0.0005
1622894_at
188.9
P
0.0481
1622895_at
759.3
P
0.0026
1622896_at
425.2
P
0.0005
1622897_at
19.6
A
0.4875
1622898_a_at
813.9
P
0.0005
1622899_at
58.8
P
0.0320
1622900_at
38.2
M
0.0547
1622901_at
387.8
P
0.0032
1622902_at
388.4
P
0.0368
1622903_s_at
596.4
P
0.0005
1622904_at
36.2
P
0.0368
1622905_at
8.8
A
0.8016
1622906_at
1008.1
P
0.0006
1622907_at
534.3
P
0.0006
1622908_a_at
166.8
P
0.0152
1622909_at
1365.3
P
0.0005
1622910_at
64.7
A
0.1984
18769 474 Kbytes .Supplementary data files not provided
