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Status
Public on Oct 01, 2007
Title
Low Group, Line 2, Replicate 1, Male
Sample type
RNA
Source name
Male Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult male flies of the low group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
[email protected] Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5956 Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
14029.4
P
0.0005
1622892_s_at
641.0
P
0.0005
1622893_at
7254.9
P
0.0005
1622894_at
183.0
P
0.0129
1622895_at
188.1
P
0.0129
1622896_at
358.9
P
0.0005
1622897_at
44.1
A
0.2352
1622898_a_at
386.8
P
0.0005
1622899_at
18.2
A
0.2968
1622900_at
15.7
A
0.1984
1622901_at
380.7
P
0.0005
1622902_at
588.4
P
0.0066
1622903_s_at
223.5
P
0.0005
1622904_at
31.3
A
0.1984
1622905_at
1.9
A
0.8773
1622906_at
467.1
P
0.0009
1622907_at
518.6
P
0.0008
1622908_a_at
101.4
M
0.0547
1622909_at
414.4
P
0.0005
1622910_at
16.4
A
0.3649
18769 476 Kbytes .Supplementary data files not provided
