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Status
Public on Oct 01, 2007
Title
control Group, Line 1, Replicate 1, Female
Sample type
RNA
Source name
Female Drosophila adults, age 3-7 days
Organism
Drosophila melanogaster Characteristics
artificially selected, wild-derived lines
Extracted molecule
total RNA
Extraction protocol
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
Label
biotin
Description
Gene expression data from adult female flies of the control group of an artificial selection experiment for locomotion.
Data processing
The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
Submission date
Oct 03, 2006
Last update date
Oct 03, 2006
Contact name
Katherine W Jordan
E-mail(s)
[email protected] Phone
919-515-5833
Organization name
North Carolina State University
Department
Genetics
Lab
Mackay
Street address
Campus Box 7614
City
Raleigh
State/province
NC
ZIP/Postal code
27695
Country
USA
Platform ID
GPL1322 Series (1)
GSE5956 Expression data from Drosophila subjected to artificial selection on locomotion
Data table header descriptions ID_REF Probe Set ID for Affymetrix Drosophila GeneChip 2.0
VALUE MAS5-calculated Signal intensity
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), or marginal (M)
DETECTION P-VALUE p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 1616608_a_at
18593.6
P
0.0005
1622892_s_at
368.4
P
0.0009
1622893_at
12748.6
P
0.0005
1622894_at
150.2
P
0.0240
1622895_at
717.9
P
0.0055
1622896_at
440.3
P
0.0005
1622897_at
64.6
A
0.2968
1622898_a_at
832.1
P
0.0005
1622899_at
48.8
P
0.0038
1622900_at
6.3
A
0.5375
1622901_at
323.0
P
0.0055
1622902_at
500.0
P
0.0129
1622903_s_at
595.0
P
0.0005
1622904_at
30.5
A
0.2163
1622905_at
3.9
A
0.8640
1622906_at
735.0
P
0.0008
1622907_at
649.9
P
0.0009
1622908_a_at
191.6
P
0.0129
1622909_at
1200.9
P
0.0005
1622910_at
30.9
A
0.5624
18769 474 Kbytes .Supplementary data files not provided
