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Sample GSM139670 Query DataSets for GSM139670
Status Public on Oct 13, 2006
Title A549DCA: DCA treated lung carcinoma cells
Sample type RNA
 
Source name DCA treated Cultured Lung carcinoma cells
Organism Homo sapiens
Characteristics 'Organ: Lung',
'disease : Carcinoma',
'Morphology: epithelial',
'Age: 58 years old',
'Sex: Male',
'Ethnicity : Caucasian'
Biomaterial provider American type culture collection (ATCC) Manassas, VA USA.
Treatment protocol 48 h with dichloroacetate 0.5 mM (Sigma, St Louis)
Growth protocol The A549 cells were maintained on F12K medium, Media was supplemented with 10% FBS and 5% PSF (Gibco) as antibiotic. Cultures were incubated for up to 48h prior to harvesting.
Extracted molecule total RNA
Extraction protocol Total RNA from A549 cells was extracted using Quiagen RNeasy kit (Ontario, Canada).
Label Biotin
 
Description Characteristics: Organ: Lung
disease : Carcinoma
Morphology: epithelial
Age: 58 years old
Sex: Male
Ethnicity : Caucasian
Data processing MAS5.0
 
Submission date Oct 11, 2006
Last update date Oct 11, 2006
Organization Ottawa Hospital Research Institute
Phone (613) 737-8899 -73255
Department Cellular and Molecular Medicine
Lab Ottawa Bioinformatics Core Facility
Street address 501 Smyth Rd.
City Ottawa
State/province ON
ZIP/Postal code K1H 8L6
Country Canada
 
Platform ID GPL96
Series (1)
GSE6014 A Mitochondria-K+ Channel Axis Is Suppressed in Cancer & Its Normalization Promotes Apoptosis and Inhibits Cancer Growth

Data table header descriptions
ID_REF
VALUE MAS5 Expression
ABS_CALL MAS Call
DETECTION P-VALUE MAS5 p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 9646 P 0.00034
AFFX-BioB-M_at 17060.1 P 0.000044
AFFX-BioB-3_at 8998.1 P 0.000044
AFFX-BioC-5_at 23534.7 P 0.00006
AFFX-BioC-3_at 18826.8 P 0.000052
AFFX-BioDn-5_at 16231 P 0.000044
AFFX-BioDn-3_at 107143.2 P 0.000044
AFFX-CreX-5_at 242732.7 P 0.000044
AFFX-CreX-3_at 357696.7 P 0.000044
AFFX-DapX-5_at 77892.3 P 0.000044
AFFX-DapX-M_at 288053.1 P 0.000044
AFFX-DapX-3_at 354946.5 P 0.000044
AFFX-LysX-5_at 19110.4 P 0.000044
AFFX-LysX-M_at 147420.4 P 0.000044
AFFX-LysX-3_at 342710.2 P 0.000044
AFFX-PheX-5_at 7805.7 P 0.000044
AFFX-PheX-M_at 15175 P 0.000044
AFFX-PheX-3_at 126464.8 P 0.000044
AFFX-ThrX-5_at 1048.7 P 0.011384
AFFX-ThrX-M_at 2986.2 P 0.000169

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM139670.CEL.gz 3.1 Mb (ftp)(http) CEL

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