|
| Status |
Public on May 24, 2014 |
| Title |
DERL-2 |
| Sample type |
genomic |
| |
|
| Channel 1 |
| Source name |
Hepatosplenic T-cell Lymphoma
|
| Organism |
Homo sapiens |
| Characteristics |
tissue: Hepatosplenic T-cell Lymphoma
karyotype: 46,XY,add(5)(q?),i(7)(q10),-10[5][cp15]c .aCGH+8
|
| Treatment protocol |
no treatment
|
| Growth protocol |
natural tumor
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
standard DNA extraction protocol
|
| Label |
Cy5
|
| Label protocol |
Agilent lable protocol
|
| |
|
| Channel 2 |
| Source name |
control
|
| Organism |
Homo sapiens |
| Characteristics |
sample type: Normal DAN sample from Agilent
|
| Treatment protocol |
no treatment
|
| Growth protocol |
natural tumor
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
standard DNA extraction protocol
|
| Label |
Cy3
|
| Label protocol |
Agilent lable protocol
|
| |
|
| |
| Hybridization protocol |
Oligoarray control targets and hybridization buffer (Agilent In Situ Hybridization Kit Plus) were added, and samples were applied to microarrays enclosed in Agilent SureHyb-enabled hybridization chambers. After hybridization, slides were washed sequential
|
| Scan protocol |
Agilent Scanner protocol for a full slide
|
| Data processing |
Agilent Feature Extraction Software (v 9.1.1) was used for background subtraction and LOWESS normalization.
|
| |
|
| Submission date |
May 23, 2014 |
| Last update date |
May 24, 2014 |
| Contact name |
Julio Finalet |
| E-mail(s) |
[email protected]
|
| Organization name |
KULeuven
|
| Street address |
Herestraat 49
|
| City |
Leuven |
| ZIP/Postal code |
3000 |
| Country |
Belgium |
| |
|
| Platform ID |
GPL9128 |
| Series (2) |
| GSE57942 |
aCGH data of 5 cases of Hepatosplenic T-cell lymphoma |
| GSE57944 |
Hepatosplenic T cell lymphoma |
|
