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Sample GSM1402907 Query DataSets for GSM1402907
Status Public on Jun 04, 2014
Title shEbf1 Hairpin 1_repeat2
Sample type RNA
 
Source name shEbf1 Hairpin 1
Organism Mus musculus
Characteristics cell type: 3T3L1
lentivirus: shEbf1 Hairpin 1
Treatment protocol Mature 3T3-L1 cells were subjected to 3-4 serial infections with virus, and selected with 5 μg/ml puromycin for at least 8 days prior to harvest.
Extracted molecule total RNA
Extraction protocol amplification with the NuGEN Ovation WTA Pico kit
Label biotin
Label protocol labeling with Encore Biotin Module.
 
Hybridization protocol As manufacturer's instruction
Scan protocol As manufacturer's instruction
Description shEbf1 Hairpin 1
Data processing RMA procedure in BioConductor package for summarization and normalization
 
Submission date Jun 03, 2014
Last update date Jun 04, 2014
Contact name Evan Rosen
E-mail(s) [email protected]
Organization name Beth Israel Deconess Medical Center
Department Endocrinology
Lab Rosen Lab
Street address 3 Blackfan Cir
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE58193 Characterizing the profiles of Ebf1 in mouse fat cells.

Data table header descriptions
ID_REF
VALUE RMA normalized signals

Data table
ID_REF VALUE
1415670_at 11.24957232
1415671_at 13.51574887
1415672_at 12.70279995
1415673_at 11.35240746
1415674_a_at 11.03417954
1415675_at 11.44219953
1415676_a_at 12.56973815
1415677_at 10.48820248
1415678_at 12.47280597
1415679_at 12.4332756
1415680_at 10.82984445
1415681_at 12.10891553
1415682_at 8.071491922
1415683_at 12.98196525
1415684_at 9.51286828
1415685_at 10.52704231
1415686_at 11.17576316
1415687_a_at 13.92941231
1415688_at 11.47852582
1415689_s_at 11.31927012

Total number of rows: 45101

Table truncated, full table size 1026 Kbytes.




Supplementary file Size Download File type/resource
GSM1402907_HURLS_p_Griffin_Affy_Redo_Mouse430_2_A05_1037718.CEL.gz 3.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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