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Sample GSM140782 Query DataSets for GSM140782
Status Public on Oct 18, 2007
Title 1.0 mM As(III) stressed wild-type vs (non-stressed) wild-type after 18 hours replicate 3
Sample type RNA
 
Channel 1
Source name Wild-type untreated
Organism Saccharomyces cerevisiae
Characteristics Wild-type untreated
Treatment protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Growth protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Extracted molecule total RNA
Extraction protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Label Cy3
Label protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 1688541
 
Channel 2
Source name Stressed wild-type at 1 mM As(III) after 18 h
Organism Saccharomyces cerevisiae
Characteristics Stressed wild-type at 1 mM As(III) after 18 h
Treatment protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Growth protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Extracted molecule total RNA
Extraction protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Label Cy5
Label protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 1688541
 
 
Hybridization protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Scan protocol See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Description See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
Data processing See 'The MAPK Hog1p Modulates Fps1p-dependent Arsenite Uptake and Tolerance in Yeast' Mol Biol Cell. 2006 Oct;17(10):4400-4410, PMID: 16885417
VALUEs represent log2 (test/control) ratios.
 
Submission date Oct 18, 2006
Last update date Oct 25, 2006
Contact name Erik Kristiansson
E-mail(s) [email protected]
Organization name Chalmers University of Technology
Department Department of Mathematical Sciences
Street address Chalmers Tvärgata 3
City Göteborg
ZIP/Postal code 412 96
Country Sweden
 
Platform ID GPL4462
Series (2)
GSE6068 Time Course 1.0 mM As(III)
GSE6129 Arsenate stress response: Saccharomyces cerevisiae

Data table header descriptions
ID_REF
VALUE log2(R)/log2(G)
R Cy5 channel intensity
Rb Cy5 channel background intensity
G Cy3 channel intensity
Gb Cy3 channel background intensity

Data table
ID_REF VALUE R Rb G Gb
1 0.386233470631466 281 329 215 155
2 0.569365645670137 276 274 186 147
3 -1.55097881925849 1575 274 4615 158
4 -1.87547764297706 1170 416 4293 173
5 0.687700606310413 451 404 280 150
6 0.702733959346906 472 420 290 152
7 -0.914819619426156 375 418 707 172
8 0.561878887608114 372 382 252 153
9 0.241008099503796 1014 370 858 144
10 0.23986059891366 914 369 774 138
11 0.598259323334615 327 390 216 139
12 0.644905041177438 344 404 220 144
13 0.209453365628949 185 379 160 141
14 0.482500467057583 197 366 141 141
15 0.274859841230582 294 391 243 142
16 0.293583469193401 315 411 257 147
17 1.26821750814259 725 328 301 171
18 1.79656164198360 799 358 230 143
19 1.53127462982717 1055 329 365 147
20 1.46628015261643 1003 386 363 144

Total number of rows: 13056

Table truncated, full table size 500 Kbytes.




Supplementary file Size Download File type/resource
GSM140782.gpr.gz 1023.2 Kb (ftp)(http) GPR
GSM140782_1.gpr.gz 1.0 Mb (ftp)(http) GPR

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