|
| Status |
Public on Jan 01, 2008 |
| Title |
AA105 |
| Sample type |
RNA |
| |
|
| Source name |
bronchoalveolar lavage cells (Rejection)
|
| Organism |
Homo sapiens |
| Characteristics |
Male; Months since transplant=5; %PMN=6; %Lym=6
|
| Extracted molecule |
total RNA |
| Extraction protocol |
TRIzol w/ Qiagen RNeasy cleanup
|
| Label |
biotin
|
| Label protocol |
Approximately 10 µg of total RNA was processed to produce biotinylated cRNA targets
|
| |
|
| Hybridization protocol |
standard Affymetrix procedures
|
| Scan protocol |
standard Affymetrix procedures
|
| Description |
Bronchoalveolar lavage fluid from lung tx recipient with AB score = 3 (Rejection)
|
| Data processing |
Bioconductor - RMA - affy version 1.10.0
|
| |
|
| Submission date |
Oct 18, 2006 |
| Last update date |
Jun 21, 2007 |
| Contact name |
Jeff Lande |
| E-mail(s) |
[email protected]
|
| Phone |
612-625-5628
|
| Organization name |
University of Minnesota
|
| Department |
Medicine
|
| Street address |
420 Washington Avenue SE
|
| City |
Minneapolis |
| State/province |
MN |
| ZIP/Postal code |
55455 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE6095 |
Diagnosis of Acute Lung Rejection by Gene Expression Profiling of Bronchoalveolar Lavage Cells |
|
