|
| Status |
Public on Jan 05, 2015 |
| Title |
LTL331_Cx_2wk |
| Sample type |
RNA |
| |
|
| Source name |
Prostate tumor, Patient derived xenograft
|
| Organism |
Homo sapiens |
| Characteristics |
tumor subtype: Adenocarcinoma
time post host castration: 2 week
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Not provided
|
| Label |
Cy3
|
| Label protocol |
100ng of total RNA was used as input for generation of Cyanine-3-labeled cRNA following Agilent’s One-Color Microarray-Based Gene Expression Analysis Low Input Quick Amp Labeling v6.6.
|
| |
|
| Hybridization protocol |
600ng labeled cRNA was hybridized on Agilent SurePrint G3 Human GE 8x60K Microarray (Design ID 028004)
|
| Scan protocol |
Slides were scanned with the Agilent DNA Microarray Scanner at a 3um scan resolution using the one colour GE and 20 bit tiff file settings
|
| Data processing |
Image files were processed with Agilent Feature Extraction 11.0.1.1 to produce spatially detrended and background subtracted gProcessedSignal intensities
|
| |
|
| Submission date |
Jul 31, 2014 |
| Last update date |
Jan 05, 2015 |
| Contact name |
Shawn Anderson |
| E-mail(s) |
[email protected]
|
| Organization name |
Vancouver Prostate Centre
|
| Lab |
Laboratory for Advanced Genome Analysis
|
| Street address |
2660 Oak Street
|
| City |
Vancouver |
| State/province |
BC |
| ZIP/Postal code |
V6H3Z6 |
| Country |
Canada |
| |
|
| Platform ID |
GPL14550 |
| Series (2) |
| GSE59984 |
The placental gene PEG10 promotes progression of neuroendocrine prostate cancer [Expression] |
| GSE59986 |
The placental gene PEG10 promotes progression of neuroendocrine prostate cancer |
|
