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Sample GSM14844

Query DataSets for GSM14844

Status

Public on Jan 17, 2004

Title

I-12_PRE

Sample type

RNA

Source name

Left Cardiac Ventricle

Organism

Homo sapiens

Extracted molecule

total RNA

Description

19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart
Keywords = Cardiac
Keywords = Assist Device
Keywords = LVAD
Keywords = GATA-4
Keywords = Sprouty1
Keywords = microarray
Keywords = heart failure

Submission date

Jan 06, 2004

Last update date

Oct 28, 2005

Contact name

Grindle M Suzanne

E-mail(s)

[email protected]

Phone

612-624-2143

Organization name

Lillehei Heart Institute

Department

Division of Cardiology

Lab

Hall Cardiology

Street address

Dwan CVRC 289, MMC 508, 420 Delaware Street SE

City

Minneapolis

State/province

ZIP/Postal code

55455

Country

USA

Platform ID

GPL96

Series (1)

GSE974

Left ventricular apex samples

Data table header descriptions
ID_REF
VALUE	'signal' a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE	'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	149.4	P	0.01667
AFFX-BioB-M_at	211.3	P	0.00762
AFFX-BioB-3_at	104.7	A	0.089478
AFFX-BioC-5_at	302.2	P	0.000857
AFFX-BioC-3_at	219.7	P	0.000446
AFFX-BioDn-5_at	262	P	0.000446
AFFX-BioDn-3_at	2217.8	P	0.000297
AFFX-CreX-5_at	3184.9	P	0.000044
AFFX-CreX-3_at	4538.7	P	0.000044
AFFX-DapX-5_at	35.7	A	0.139482
AFFX-DapX-M_at	32.2	A	0.175328
AFFX-DapX-3_at	3.5	A	0.932322
AFFX-LysX-5_at	4.1	A	0.617401
AFFX-LysX-M_at	22.5	A	0.425962
AFFX-LysX-3_at	12.6	A	0.327079
AFFX-PheX-5_at	2.6	A	0.794268
AFFX-PheX-M_at	3	A	0.945787
AFFX-PheX-3_at	14.9	A	0.672921
AFFX-ThrX-5_at	11.1	A	0.672921
AFFX-ThrX-M_at	13.5	A	0.574038

Total number of rows: 22283

Table truncated, full table size 587 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM14844.CEL.gz	3.6 Mb	(ftp)(http)	CEL
Processed data included within Sample table