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Sample GSM148690 Query DataSets for GSM148690
Status Public on Apr 30, 2008
Title Mock Infection A
Sample type RNA
 
Source name Mock Infected HMVEC-L (Mock A)
Organism Homo sapiens
Characteristics none
Extracted molecule total RNA
Extraction protocol Cells in culture were harvested, homogenized, and total RNA was extracted using the Qiagen MiniElute protocol (Qiagen, Valencia, CA).
Label biotin
Label protocol Approximately 5 micrograms of total RNA was processed to produce biotinylated cRNA targets using the older (ENZO) Affymetrix protocol
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Mock Infected HMVEC-L
Data processing GCRMA
 
Submission date Dec 06, 2006
Last update date Aug 28, 2018
Contact name Christopher D Coldren
E-mail(s) [email protected]
Phone 303 724 6056
Organization name University of Colorado School of Medicine
Department Medicine
Lab Pulmonary Sciences and Critical Care Medicine
Street address 12700 East 17th Place
City Aurora
State/province CO
ZIP/Postal code 80045
Country USA
 
Platform ID GPL570
Series (1)
GSE6489 Human Herpesvirus-8 infection of pulmonary microvascular entdothelial cells
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF Affymetrix probeset ID
VALUE Average intensity for probe set
ABS_CALL

Data table
ID_REF VALUE ABS_CALL
1007_s_at 9.506520411 P
1053_at 9.097197046 P
117_at 4.162236763 A
121_at 8.072436363 P
1255_g_at 2.056717446 A
1294_at 7.855628696 P
1316_at 5.564979968 P
1320_at 6.632104107 P
1405_i_at 5.947490895 P
1431_at 3.343464588 P
1438_at 2.303473323 A
1487_at 8.956751431 P
1494_f_at 3.834104393 M
1552256_a_at 8.85898873 P
1552257_a_at 9.217077971 P
1552258_at 6.221558124 P
1552261_at 4.259625519 A
1552263_at 8.04298166 P
1552264_a_at 9.913002871 P
1552266_at 3.502002402 A

Total number of rows: 54675

Table truncated, full table size 1318 Kbytes.




Supplementary file Size Download File type/resource
GSM148690.CEL.gz 5.6 Mb (ftp)(http) CEL

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