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Status
Public on Jan 17, 2004
Title
I-4_PRE
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
[email protected] Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
82
P
0.002023
AFFX-BioB-M_at
197.8
P
0.00011
AFFX-BioB-3_at
86.5
P
0.002275
AFFX-BioC-5_at
214
P
0.000147
AFFX-BioC-3_at
160.4
P
0.000147
AFFX-BioDn-5_at
202.6
P
0.00007
AFFX-BioDn-3_at
1404.3
P
0.000081
AFFX-CreX-5_at
1981.3
P
0.000044
AFFX-CreX-3_at
2960.4
P
0.000044
AFFX-DapX-5_at
1.2
A
0.544587
AFFX-DapX-M_at
8.7
A
0.382599
AFFX-DapX-3_at
0.8
A
0.966323
AFFX-LysX-5_at
6.9
A
0.102165
AFFX-LysX-M_at
2.1
A
0.574038
AFFX-LysX-3_at
0.7
A
0.574038
AFFX-PheX-5_at
1.1
A
0.794268
AFFX-PheX-M_at
1.8
A
0.772364
AFFX-PheX-3_at
11
A
0.60308
AFFX-ThrX-5_at
1.9
A
0.843268
AFFX-ThrX-M_at
2.1
A
0.672921
22283 578 Kbytes .Supplementary file Size Download File type/resource GSM14940.CEL.gz
3.3 Mb
(ftp) (http) CEL
Processed data included within Sample table
