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Sample GSM14954

Query DataSets for GSM14954

Status

Public on Jan 17, 2004

Title

IM-6_PRE

Sample type

RNA

Source name

Left Cardiac Ventricle

Organism

Homo sapiens

Extracted molecule

total RNA

Description

19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart
Keywords = Cardiac
Keywords = Assist Device
Keywords = LVAD
Keywords = GATA-4
Keywords = Sprouty1
Keywords = microarray
Keywords = heart failure

Submission date

Jan 07, 2004

Last update date

Oct 28, 2005

Contact name

Grindle M Suzanne

E-mail(s)

[email protected]

Phone

612-624-2143

Organization name

Lillehei Heart Institute

Department

Division of Cardiology

Lab

Hall Cardiology

Street address

Dwan CVRC 289, MMC 508, 420 Delaware Street SE

City

Minneapolis

State/province

ZIP/Postal code

55455

Country

USA

Platform ID

GPL96

Series (1)

GSE974

Left ventricular apex samples

Data table header descriptions
ID_REF
VALUE	'signal' a measure of the abundance of a transcript
ABS_CALL	the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE	'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	65.9	P	0.009337
AFFX-BioB-M_at	116.3	P	0.001102
AFFX-BioB-3_at	48.8	P	0.01667
AFFX-BioC-5_at	180.9	P	0.000195
AFFX-BioC-3_at	133.6	P	0.000169
AFFX-BioDn-5_at	106.6	P	0.000127
AFFX-BioDn-3_at	1002.3	P	0.00011
AFFX-CreX-5_at	1013.6	P	0.000044
AFFX-CreX-3_at	1549.3	P	0.000044
AFFX-DapX-5_at	7.8	A	0.185131
AFFX-DapX-M_at	10.2	A	0.108979
AFFX-DapX-3_at	1.5	A	0.941556
AFFX-LysX-5_at	0.5	A	0.737173
AFFX-LysX-M_at	12.1	A	0.382599
AFFX-LysX-3_at	6.8	A	0.313723
AFFX-PheX-5_at	1.4	A	0.814869
AFFX-PheX-M_at	0.8	A	0.945787
AFFX-PheX-3_at	4.5	A	0.60308
AFFX-ThrX-5_at	1.5	A	0.868639
AFFX-ThrX-M_at	1	A	0.860518

Total number of rows: 22283

Table truncated, full table size 578 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM14954.CEL.gz	3.3 Mb	(ftp)(http)	CEL
Processed data included within Sample table