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Sample GSM15395

Query DataSets for GSM15395

Status

Public on Jan 30, 2004

Title

APL_RA1

Sample type

RNA

Source name

primary APL cells treated with ATRA

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Sample from a leukopharesis of a patient with acute promyelocytic leukemia (APL) with a t(15;17) and a white blood cell count of 185,000 with 97% myeloblasts at diagnosis treated with 1uM ATRA for 5 days. Target preparation and hybridization as described in Stegmaier et al., Nature Genetics 2004.
Keywords = APL Leukemia

Submission date

Jan 16, 2004

Last update date

May 28, 2005

Contact name

Ken Ross

E-mail(s)

[email protected]

Phone

617-714-7473

Fax

617-714-8955

URL

http://www.broad.mit.edu/cancer/

Organization name

Broad Institute

Department

Cancer Genomics

Lab

Golub Lab

Street address

7 Cambridge Center

City

Cambridge

State/province

ZIP/Postal code

02142

Country

USA

Platform ID

GPL96

Series (2)

GSE976	Gene Expression-Based High Throughput Screening: APL Treatment with Candidate Compounds
GSE995	Differentiation of acute myeloid leukemia cells

Data table header descriptions
ID_REF
VALUE	Affymetrix GeneChip MAS5 Signal
ABS_CALL	Affymetrix GeneChip MAS5 A,M, or P Call

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	2.1	A
AFFX-BioB-M_at	1.8	A
AFFX-BioB-3_at	2.6	A
AFFX-BioC-5_at	18.6	A
AFFX-BioC-3_at	3.3	A
AFFX-BioDn-5_at	2.3	A
AFFX-BioDn-3_at	172.5	A
AFFX-CreX-5_at	1.0	A
AFFX-CreX-3_at	6.0	A
AFFX-DapX-5_at	10.6	A
AFFX-DapX-M_at	12.6	A
AFFX-DapX-3_at	0.9	A
AFFX-LysX-5_at	0.6	A
AFFX-LysX-M_at	5.7	A
AFFX-LysX-3_at	17.1	A
AFFX-PheX-5_at	1.8	A
AFFX-PheX-M_at	4.3	A
AFFX-PheX-3_at	14.7	A
AFFX-ThrX-5_at	1.9	A
AFFX-ThrX-M_at	5.6	A

Total number of rows: 22283

Table truncated, full table size 391 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM15395.CEL.gz	3.4 Mb	(ftp)(http)	CEL
Processed data included within Sample table