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Sample GSM154497 Query DataSets for GSM154497
Status Public on Aug 28, 2007
Title H1819 High dose treatment group (1000 nM)
Sample type RNA
 
Source name NSCLC cell line
Organism Homo sapiens
Characteristics See publication for details.
Treatment protocol High dose treatment group (1000 nM). DMSO qod for 6 days.
Growth protocol See publication for details.
Extracted molecule total RNA
Extraction protocol Trizol
Label biotin
Label protocol Affymetrix
 
Hybridization protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Scan protocol please see the Southwestern Medical Center Microarray Core Facility website for details
Description H1819 High dose treatment group (1000 nM). DMSO qod for 6 days.
Data processing Raw signal data without normalization
 
Submission date Jan 09, 2007
Last update date Aug 28, 2018
Contact name David S Shames
E-mail(s) [email protected]
Phone 650-225-7559
Organization name Genentech Inc
Department Oncology Biomarker Development
Lab Shames
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (2)
GSE5816 A Genome-wide Screen for Hypermethylated Genes in Lung Cancer
GSE6695 Genome-wide screen for promoter methylation in NSCLC identifies novel methylation markers for multiple malignancies
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE Raw signal

Data table
ID_REF VALUE
AFFX-BioB-5_at 533.8
AFFX-BioB-M_at 720.3
AFFX-BioB-3_at 378.5
AFFX-BioC-5_at 1440
AFFX-BioC-3_at 1687.4
AFFX-BioDn-5_at 3307.8
AFFX-BioDn-3_at 8418.2
AFFX-CreX-5_at 18422.5
AFFX-CreX-3_at 20476.7
AFFX-DapX-5_at 30.9
AFFX-DapX-M_at 17.9
AFFX-DapX-3_at 15.2
AFFX-LysX-5_at 21.9
AFFX-LysX-M_at 9.7
AFFX-LysX-3_at 3.4
AFFX-PheX-5_at 6.8
AFFX-PheX-M_at 1.9
AFFX-PheX-3_at 9
AFFX-ThrX-5_at 4.9
AFFX-ThrX-M_at 6.4

Total number of rows: 54675

Table truncated, full table size 850 Kbytes.




Supplementary file Size Download File type/resource
GSM154497.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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