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Sample GSM1576702 Query DataSets for GSM1576702
Status Public on Jan 06, 2015
Title NN_F2
Sample type RNA
 
Source name NeuN cell line_flow_IFF
Organism Homo sapiens
Characteristics interstitial fluid flow (iff) status: flow
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol not provided
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
8556388109_K
Data processing The data were normalised using quantile normalisation in PARTEK software
 
Submission date Jan 05, 2015
Last update date Jan 06, 2015
Contact name Alimatou M Tchafa
E-mail(s) [email protected]
Phone 2672428234
Organization name UT Southwestern Medical Center
Department Biochemistry
Lab Hamid Mirzaei
Street address 5323 Harry Hines Blvd, Rm Y4.306
City Dallas
State/province TEXAS
ZIP/Postal code 75390
Country USA
 
Platform ID GPL10558
Series (1)
GSE64670 EMT Alters Interstitial Fluid Flow-induced Signaling in ERBB2-positive Breast Cancer

Data table header descriptions
ID_REF
VALUE quantile normalized signal

Data table
ID_REF VALUE
ILMN_1762337 8.05903
ILMN_2055271 8.29957
ILMN_1736007 7.81169
ILMN_2383229 7.90555
ILMN_1806310 8.10452
ILMN_1779670 8.22989
ILMN_1653355 8.26598
ILMN_1717783 7.52103
ILMN_1705025 8.0433
ILMN_1814316 7.79761
ILMN_2359168 7.96832
ILMN_1731507 7.74536
ILMN_1787689 8.09977
ILMN_3241953 9.96006
ILMN_1745607 7.71596
ILMN_2136495 7.69196
ILMN_1668111 7.79719
ILMN_2295559 8.04303
ILMN_1735045 11.0922
ILMN_1680754 8.49197

Total number of rows: 47323

Table truncated, full table size 965 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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