NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM172349 Query DataSets for GSM172349
Status Public on Dec 28, 2007
Title activin-knockout granulosa cells replicate 2
Sample type RNA
 
Source name isolated granulosa cells
Organism Mus musculus
Characteristics KO: Inhba flox/-;Inhbb-/-;Amhr2cre/+, Background Strain: C57BL/6J;129S5/SvEvBrd, gender: female, age: 21d treated for 44-46h PMSG pooled from 2-3 females, cell type: isolated granulosa cells
Treatment protocol granulosa cells collected from 2-3 activin-deficient mutant female mice after 44-46 h PMSG injected i.p.
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Prep with on column DNAse treatment
Label Biotin
Label protocol Affymetrix Standard Protocol
 
Hybridization protocol Affymetrix standard
Scan protocol GeneChip Scanner 3000
Description No additional descriptions
Data processing MAS5 default
 
Submission date Feb 27, 2007
Last update date Aug 28, 2018
Contact name Martin Matzuk
Organization name Baylor College of Medicine
Street address One Baylor Plaza
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL1261
Series (1)
GSE7150 Activin-deficient granulosa cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE MAS5 normalized signal intensity
ABS_CALL MAS5 flagged detection call

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 804.5 P
AFFX-BioB-M_at 1239.7 P
AFFX-BioB-3_at 776.2 P
AFFX-BioC-5_at 2653.8 P
AFFX-BioC-3_at 3106.9 P
AFFX-BioDn-5_at 5038.3 P
AFFX-BioDn-3_at 9435.1 P
AFFX-CreX-5_at 26714.1 P
AFFX-CreX-3_at 30015.8 P
AFFX-DapX-5_at 6.3 A
AFFX-DapX-M_at 36.9 A
AFFX-DapX-3_at 9.1 A
AFFX-LysX-5_at 4.4 A
AFFX-LysX-M_at 57.1 A
AFFX-LysX-3_at 31.5 A
AFFX-PheX-5_at 2.8 A
AFFX-PheX-M_at 1.9 A
AFFX-PheX-3_at 67.7 A
AFFX-ThrX-5_at 46.4 A
AFFX-ThrX-M_at 6 A

Total number of rows: 45101

Table truncated, full table size 829 Kbytes.




Supplementary file Size Download File type/resource
GSM172349.cel.gz 6.2 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap