 |
 |
GEO help: Mouse over screen elements for information. |
|
| Status |
Public on Feb 15, 2008 |
| Title |
O#95 |
| Sample type |
RNA |
| |
|
| Source name |
bone marrow
|
| Organism |
Homo sapiens |
| Characteristics |
Male, 126 months of age
|
| Biomaterial provider |
COG cell bank
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Qiagen Rneasy
|
| Label |
biotin
|
| Label protocol |
Enzo BioArray HighYield RNA transcript labeling kit
|
| |
|
| Hybridization protocol |
Affymetrix:Protocol:Hybridization-EukGE-WS2v4_450
|
| Scan protocol |
M10 scanner, Pixel size 1.56, Filter 570
|
| Description |
CCR: continuous complete remission for > 4 years
|
| Data processing |
MAS 5.0
|
| |
|
| Submission date |
Apr 03, 2007 |
| Last update date |
Nov 14, 2018 |
| Contact name |
Deepa Bhojwani |
| E-mail(s) |
[email protected]
|
| Organization name |
New York University School of Medicine
|
| Department |
Pediatric Hematology Oncology
|
| Street address |
Smilow Research Building 1206-B, 522 First Avenue
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10016 |
| Country |
USA |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE7440 |
Early Response and Outcome in High-Risk Childhood Acute Lymphoblastic Leukemia: A Children’s Oncology Group Study |
|
| Relations |
| Reanalyzed by |
GSE64985 |
| Reanalyzed by |
GSE119087 |
| Reanalyzed by |
GSE122511 |
| Data table header descriptions |
| ID_REF |
|
| VALUE |
Signal |
| ABS_CALL |
indicating whether the transcript was present (P), absent (A), or marginal (M) |
| DETECTION P-VALUE |
|
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| AFFX-BioB-5_at |
133.221 |
P |
0.000169227 |
| AFFX-BioB-M_at |
196.003 |
P |
4.42873e-05 |
| AFFX-BioB-3_at |
109.846 |
P |
0.000258358 |
| AFFX-BioC-5_at |
749.779 |
P |
4.42873e-05 |
| AFFX-BioC-3_at |
775.881 |
P |
4.42873e-05 |
| AFFX-BioDn-5_at |
1186.15 |
P |
4.42873e-05 |
| AFFX-BioDn-3_at |
2491.08 |
P |
4.42873e-05 |
| AFFX-CreX-5_at |
5961.65 |
P |
4.42873e-05 |
| AFFX-CreX-3_at |
6183.19 |
P |
4.42873e-05 |
| AFFX-DapX-5_at |
14.6826 |
P |
0.0309764 |
| AFFX-DapX-M_at |
2.38283 |
A |
0.834139 |
| AFFX-DapX-3_at |
1.57342 |
A |
0.897835 |
| AFFX-LysX-5_at |
14.6418 |
A |
0.108979 |
| AFFX-LysX-M_at |
8.26986 |
A |
0.603089 |
| AFFX-LysX-3_at |
2.49316 |
A |
0.645547 |
| AFFX-PheX-5_at |
3.3983 |
A |
0.672921 |
| AFFX-PheX-M_at |
1.53078 |
A |
0.957038 |
| AFFX-PheX-3_at |
5.05102 |
A |
0.559354 |
| AFFX-ThrX-5_at |
2.67196 |
A |
0.659339 |
| AFFX-ThrX-M_at |
1.52363 |
A |
0.953518 |
Total number of rows: 54675
Table truncated, full table size 1609 Kbytes.
| Supplementary file |
Size |
Download |
File type/resource |
| GSM180228.CEL.gz |
8.0 Mb |
(ftp)(http) |
CEL |
| GSM180228.CHP.gz |
12.7 Mb |
(ftp)(http) |
CHP |
| GSM180228.EXP.gz |
525 b |
(ftp)(http) |
EXP |
| Processed data provided as supplementary file |
| Processed data included within Sample table |
|
|
|
|
 |
