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Sample GSM18485 Query DataSets for GSM18485
Status Public on Mar 24, 2004
Title PGA_PA-S_342
Sample type RNA
 
Source name Left Ventricle Biopsy
Organism Homo sapiens
Extracted molecule total RNA
 
Description To establish changes in cardiac transcription profiles brought about by heart failure we collected myocardial samples from patients undergoing cardiac transplantation whose failure arises from different etiologies (e.g. idiopathic dilated cardiomyopathy, ischemic cardiomyopathy, alcoholic cardiomyopathy, valvular cardiomyopathy, and hypertrophic cardiomyopathy) and from "normal" organ donors whose hearts cannot be used for transplants. The transcriptional profile of the mRNA in these samples will be measured with gene array technology. Changes in transcriptional profiles can be correlated with the physiologic profile of heart-failure hearts acquired at the time of transplantation.http://cardiogenomics.med.harvard.edu/project-detail?project_id=229
Keywords = human, idiopathic, ischemic, cardiac, hypertrophy
 
Submission date Mar 10, 2004
Last update date Aug 28, 2018
Contact name Martina Schinke
URL http://www.cardiogenomics.org
Organization name Harvard University
Department Bauer Center for Genomic Research
Lab Cardiogenomics
Street address 7 Divinity Ave
City Cambridge
State/province MA
ZIP/Postal code 02138
Country USA
 
Platform ID GPL570
Series (1)
GSE1145 changes in cardiac transcription profiles brought about by heart failure
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 383.7 P 0.001796
AFFX-BioB-M_at 638.7 P 0.000754
AFFX-BioB-3_at 279.9 P 0.010317
AFFX-BioC-5_at 959.1 P 0.000195
AFFX-BioC-3_at 890 P 0.00006
AFFX-BioDn-5_at 1255.2 P 0.00006
AFFX-BioDn-3_at 6781.8 P 0.000297
AFFX-CreX-5_at 11565.8 P 0.000052
AFFX-CreX-3_at 13364.4 P 0.000044
AFFX-DapX-5_at 47 A 0.089478
AFFX-DapX-M_at 28.7 A 0.470241
AFFX-DapX-3_at 5.9 A 0.953518
AFFX-LysX-5_at 34.6 P 0.042962
AFFX-LysX-M_at 33.7 A 0.574038
AFFX-LysX-3_at 5.4 A 0.645547
AFFX-PheX-5_at 3.9 A 0.724854
AFFX-PheX-M_at 6.9 A 0.876428
AFFX-PheX-3_at 20.4 A 0.724854
AFFX-ThrX-5_at 14.8 A 0.645547
AFFX-ThrX-M_at 43.3 A 0.275146

Total number of rows: 54675

Table truncated, full table size 1450 Kbytes.




Supplementary file Size Download File type/resource
GSM18485_PA-S_342.cel.gz 8.8 Mb (ftp)(http) CEL
Processed data included within Sample table

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