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Sample GSM1867171 Query DataSets for GSM1867171
Status Public on Sep 02, 2016
Title group 1, no IPC and 90 minutes warm ischemia 2
Sample type RNA
 
Source name kidney_72 hr_without IPC
Organism Sus scrofa
Characteristics breed: Yorkshire
gender: female
sample group: no IPC and 90 min warm ischemia
tissue: kidney
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from tissues using TRIzol (Invitrogen, Carlsbad, CA), in accordance with the manufacturer's protocol, and purified by RNeasy Mini Kit (Qiagen, Valencia, CA)
Label Cy3
Label protocol labeled cRNA were prepared from 1~5 ug total RNA using the Agilent’s Quick Amp Labeling Kit
 
Hybridization protocol Following fragmentation, 1.65 ug of cRNA were hybridized to the Agilent expression microarray according to the protocols provided by the manufacturer
Scan protocol Arrays were scanned using the Agilent Technologies G2600D SG12494263
Description SAMPLE 2
Data processing Array data export processing and analysis was performed using Agilent Feature Extraction v11.0.1.1
 
Submission date Sep 02, 2015
Last update date Sep 02, 2016
Contact name Young Eun Yoon
Organization name Yonsei University
Department Urology
Street address yonsei-ro 50-1
City Seoul
ZIP/Postal code 120-752
Country South Korea
 
Platform ID GPL16571
Series (1)
GSE72646 The analysis of differential gene expression after remote ischemic preconditioning of renal ischemia reperfusion injury

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
A_72_P000001 6.459421
A_72_P000006 111.9336
A_72_P000036 1983.565
A_72_P000041 45.60653
A_72_P000051 42.63564
A_72_P000056 11.54421
A_72_P000061 15.68727
A_72_P000071 4.350464
A_72_P000076 8.08567
A_72_P000086 4.401438
A_72_P000106 9.099162
A_72_P000111 369.5161
A_72_P000131 30.6744
A_72_P000136 4.579364
A_72_P000146 5.215756
A_72_P000156 20.57097
A_72_P000171 1602.924
A_72_P000176 261.0465
A_72_P000186 27.73245
A_72_P000196 4.8324

Total number of rows: 43603

Table truncated, full table size 932 Kbytes.




Supplementary file Size Download File type/resource
GSM1867171_sample_02.txt.gz 2.2 Mb (ftp)(http) TXT
Processed data included within Sample table

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