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Status
Public on Mar 28, 2004
Title
Mouse Hypothalamus Female 2
Sample type
RNA
Source name
Mouse Hypothalamus
Organism
Mus musculus
Extracted molecule
total RNA
Description
Triple selected polyA RNA for liver, kidney, ovary, testis, was obtained from Ambion (Austin, TX). Total RNA was obtained form Ambion for hypothalamus samples. All RNA samples had an agilent ratio greater than 1 indicating that degradation had not occurred. All RNA samples were prepared from a pool of 10 different animals. The total RNA samples were labeled for hybridization onto the microarray according to affymetrix protocols listed at:http://keck.med.yale.edu/affymetrix/protocols Keywords = Sex Specific Transcription, Mouse, Affymetrix, Healthy Mammalian Tissue
Submission date
Mar 26, 2004
Last update date
May 27, 2005
Contact name
Joel Rozowsky
E-mail(s)
[email protected]
Phone
203-432-5405
Organization name
Yale University
Department
Molecular Biophysics & Biochemistry
Lab
Gerstein Lab
Street address
266 Whitney Ave, Bass 437
City
New Haven
State/province
CT
ZIP/Postal code
06520
Country
USA
Platform ID
GPL339
Series (1)
GSE1148
Sex Specific Transciption in Mouse Tissues
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
255.5
P
0.020022
AFFX-BioB-M_at
288.1
P
0.002023
AFFX-BioB-3_at
123.1
P
0.023929
AFFX-BioC-5_at
663.1
P
0.000509
AFFX-BioC-3_at
375.5
P
0.000195
AFFX-BioDn-5_at
462.9
P
0.000127
AFFX-BioDn-3_at
3586.2
P
0.000340
AFFX-CreX-5_at
5600.4
P
0.000044
AFFX-CreX-3_at
9174.3
P
0.000044
AFFX-DapX-5_at
53.1
A
0.175328
AFFX-DapX-M_at
61.3
A
0.185131
AFFX-DapX-3_at
25.3
A
0.794268
AFFX-LysX-5_at
4.9
A
0.772364
AFFX-LysX-M_at
20.3
A
0.617401
AFFX-LysX-3_at
43.7
A
0.139482
AFFX-PheX-5_at
6.7
A
0.945787
AFFX-PheX-M_at
8.0
A
0.794268
AFFX-PheX-3_at
40.0
A
0.440646
AFFX-ThrX-5_at
8.1
A
0.760937
AFFX-ThrX-M_at
40.8
A
0.300606
Total number of rows: 22690 Table truncated, full table size 632 Kbytes .Supplementary data files not provided