|
| Status |
Public on Nov 04, 2015 |
| Title |
PDAC patient 1 |
| Sample type |
RNA |
| |
|
| Source name |
Peripheral blood before treatment from PDAC patient 1
|
| Organism |
Homo sapiens |
| Characteristics |
diagnosis: pancreatic ductal adenocarcinoma
gender: male
age: 56
pathological staging: UK
diabetes: no
chronic pancreatitis: no
|
| Treatment protocol |
Before any type of chemotherapy was received peripheral blood samples were collected in PAXgene Blood RNA Tubes (PreAnalytix)
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using the PAXgene Blood RNA Kit (PreAnalytiX) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
| Label |
Cy3
|
| Label protocol |
Illumina TotalPrep RNA Amplification Kit
|
| |
|
| Hybridization protocol |
Standard Illumina Human-HT12 Version 4
|
| Scan protocol |
Standard Illumina Genome Studio
|
| Description |
Transcriptome profile of peripheral blood before treatment from PDAC patient 1
SAMPLE 1
|
| Data processing |
The data were background corrected and normalized using the neqc function from the Limma package
|
| |
|
| Submission date |
Nov 03, 2015 |
| Last update date |
Nov 04, 2015 |
| Contact name |
Octavio Caba |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Jaen
|
| Department |
Health Sciences
|
| Street address |
Paraje de las Lagunillas
|
| City |
Jaen |
| State/province |
Jaen |
| ZIP/Postal code |
23071 |
| Country |
Spain |
| |
|
| Platform ID |
GPL10558 |
| Series (1) |
| GSE74629 |
Transcriptome profile of peripheral blood from pancreatic ductal adenocarcinoma patients |
|
