NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1924692 Query DataSets for GSM1924692
Status Public on Nov 04, 2015
Title Healthy control 8
Sample type RNA
 
Source name Peripheral blood from healthy control 8
Organism Homo sapiens
Characteristics diagnosis: healthy
gender: female
age: 64
pathological staging: NA
diabetes: no
chronic pancreatitis: no
Treatment protocol Before any type of chemotherapy was received peripheral blood samples were collected in PAXgene Blood RNA Tubes (PreAnalytix)
Extracted molecule total RNA
Extraction protocol RNA was extracted using the PAXgene Blood RNA Kit (PreAnalytiX) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit
 
Hybridization protocol Standard Illumina Human-HT12 Version 4
Scan protocol Standard Illumina Genome Studio
Description Transcriptome profile of peripheral blood before treatment from healthy control 8
SAMPLE 44
Data processing The data were background corrected and normalized using the neqc function from the Limma package
 
Submission date Nov 03, 2015
Last update date Nov 04, 2015
Contact name Octavio Caba
E-mail(s) [email protected]
Organization name University of Jaen
Department Health Sciences
Street address Paraje de las Lagunillas
City Jaen
State/province Jaen
ZIP/Postal code 23071
Country Spain
 
Platform ID GPL10558
Series (1)
GSE74629 Transcriptome profile of peripheral blood from pancreatic ductal adenocarcinoma patients

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 6.921476839 0.1233766
ILMN_2055271 7.071930045 0.01168831
ILMN_1736007 6.863331671 0.4298701
ILMN_2383229 6.912752742 0.1506494
ILMN_1806310 6.77265693 0.9142857
ILMN_1779670 6.804275108 0.7818182
ILMN_1653355 6.984356919 0.03376623
ILMN_1717783 6.731688718 0.9896104
ILMN_1705025 6.858937349 0.451948
ILMN_1814316 6.959377928 0.04545455
ILMN_2359168 6.858945804 0.451948
ILMN_1731507 6.835780148 0.5948052
ILMN_1787689 6.776847124 0.9051948
ILMN_3241953 6.893630555 0.238961
ILMN_1745607 6.888366431 0.2597403
ILMN_2136495 6.749126901 0.9714286
ILMN_1668111 6.850445856 0.5103896
ILMN_2295559 6.817742736 0.7090909
ILMN_1735045 6.789515507 0.851948
ILMN_1680754 6.912841328 0.1506494

Total number of rows: 47217

Table truncated, full table size 1578 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap