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Sample GSM1924698 Query DataSets for GSM1924698
Status Public on Nov 04, 2015
Title Healthy control 14
Sample type RNA
 
Source name Peripheral blood from healthy control 14
Organism Homo sapiens
Characteristics diagnosis: healthy
gender: male
age: 61
pathological staging: NA
diabetes: no
chronic pancreatitis: no
Treatment protocol Before any type of chemotherapy was received peripheral blood samples were collected in PAXgene Blood RNA Tubes (PreAnalytix)
Extracted molecule total RNA
Extraction protocol RNA was extracted using the PAXgene Blood RNA Kit (PreAnalytiX) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label Cy3
Label protocol Illumina TotalPrep RNA Amplification Kit
 
Hybridization protocol Standard Illumina Human-HT12 Version 4
Scan protocol Standard Illumina Genome Studio
Description Transcriptome profile of peripheral blood before treatment from healthy control 14
SAMPLE 50
Data processing The data were background corrected and normalized using the neqc function from the Limma package
 
Submission date Nov 03, 2015
Last update date Nov 04, 2015
Contact name Octavio Caba
E-mail(s) [email protected]
Organization name University of Jaen
Department Health Sciences
Street address Paraje de las Lagunillas
City Jaen
State/province Jaen
ZIP/Postal code 23071
Country Spain
 
Platform ID GPL10558
Series (1)
GSE74629 Transcriptome profile of peripheral blood from pancreatic ductal adenocarcinoma patients

Data table header descriptions
ID_REF
VALUE Quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1762337 6.828009239 0.5922078
ILMN_2055271 6.974991002 0.02077922
ILMN_1736007 6.819418732 0.6493506
ILMN_2383229 6.809923555 0.7116883
ILMN_1806310 6.866154867 0.3376623
ILMN_1779670 6.79093985 0.8285714
ILMN_1653355 6.865629645 0.3415585
ILMN_1717783 6.749584301 0.9597403
ILMN_1705025 6.890400018 0.2103896
ILMN_1814316 6.868804997 0.3246753
ILMN_2359168 6.798209079 0.7844156
ILMN_1731507 6.792043692 0.8181818
ILMN_1787689 6.819931635 0.6467533
ILMN_3241953 6.942763996 0.05454545
ILMN_1745607 6.794500863 0.8012987
ILMN_2136495 6.785486355 0.8558441
ILMN_1668111 6.796977437 0.7896104
ILMN_2295559 6.831281274 0.5662338
ILMN_1735045 6.871431428 0.3116883
ILMN_1680754 6.892870594 0.1974026

Total number of rows: 47217

Table truncated, full table size 1527 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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