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Sample GSM205922 Query DataSets for GSM205922
Status Public on Mar 06, 2008
Title ATF6-MER TG mouse_tamoxifen1
Sample type RNA
 
Source name TG mouse_left ventricle_tamoxifen treated_1
Organism Mus musculus
Characteristics Strain: C57BL6
Transgenic ATF6-MER
Gender: male
Age: 40 weeks
Tissue: left ventricle
Treatment: tamoxifen
Extracted molecule total RNA
Extraction protocol Tel-Test Inc RNAzol protocol
Label biotin
Label protocol See Affymetrix genechip expression analysis protocol
 
Hybridization protocol See Affymetrix genechip expression analysis protocol
Scan protocol See Affymetrix genechip expression analysis protocol
Description See Affymetrix genechip expression analysis protocol
Data processing See Affymetrix genechip expression analysis protocol
 
Submission date Jun 26, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 5233.94 P 0.000856509
AFFX-BioB-M_at 6967.62 P 4.42873e-05
AFFX-BioB-3_at 4099.46 P 8.14279e-05
AFFX-BioC-5_at 13907.6 P 7.00668e-05
AFFX-BioC-3_at 13513.3 P 4.42873e-05
AFFX-BioDn-5_at 28372.5 P 4.42873e-05
AFFX-BioDn-3_at 58150.8 P 5.16732e-05
AFFX-CreX-5_at 171982 P 5.16732e-05
AFFX-CreX-3_at 184022 P 4.42873e-05
AFFX-DapX-5_at 22.2684 A 0.712257
AFFX-DapX-M_at 220.192 A 0.250796
AFFX-DapX-3_at 27.6135 A 0.969024
AFFX-LysX-5_at 156.459 A 0.108979
AFFX-LysX-M_at 69.0795 A 0.783476
AFFX-LysX-3_at 247.692 P 0.00844047
AFFX-PheX-5_at 24.5134 A 0.9273
AFFX-PheX-M_at 43.2179 A 0.904333
AFFX-PheX-3_at 267.166 A 0.39692
AFFX-ThrX-5_at 34.8778 A 0.883908
AFFX-ThrX-M_at 242.034 A 0.239063

Total number of rows: 45101

Table truncated, full table size 1371 Kbytes.




Supplementary file Size Download File type/resource
GSM205922.CEL.gz 3.7 Mb (ftp)(http) CEL
GSM205922.CHP.gz 240.3 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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