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Sample GSM206348 Query DataSets for GSM206348
Status Public on Mar 06, 2008
Title ATF6-MER TG mouse_vehicle1
Sample type RNA
 
Source name TG mouse heart left ventricle
Organism Mus musculus
Characteristics Transgenic ATF6-MER mouse
Strain: C57 BL/6
Gender: male
Age: ~30wk
Tissue: heart LV
Treatment: vehicle
Extracted molecule total RNA
Extraction protocol Tel-Test Inc. RNAzol
Label See Affymetrix Gene Expression protocol
Label protocol See Affymetrix Gene Expression protocol
 
Hybridization protocol See Affymetrix Gene Expression protocol
Scan protocol See Affymetrix Gene Expression protocol
Description See Affymetrix Gene Expression protocol
Data processing See Affymetrix Gene Expression protocol
 
Submission date Jun 28, 2007
Last update date Aug 28, 2018
Contact name Peter J Belmont
Organization name Pfizer
Street address 10724 Science Center Drive
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL1261
Series (1)
GSE8322 Identification of MCIP1 as an ATF6-inducible ER Stress Response Gene in the Heart by Gene Expression Profiling
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE Signal intensity
ABS_CALL Qualitative call made by the software as to whether the sample was detectable. Abs_call means absent.
DETECTION P-VALUE Likelihood of transcript being present (closer to 0 is more likely)

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 5247.6 P 0.000662269
AFFX-BioB-M_at 8118.1 P 6.02111e-05
AFFX-BioB-3_at 4790.51 P 5.16732e-05
AFFX-BioC-5_at 15109.7 P 9.4506e-05
AFFX-BioC-3_at 13062.6 P 4.42873e-05
AFFX-BioDn-5_at 30197.5 P 4.42873e-05
AFFX-BioDn-3_at 76915.6 P 6.02111e-05
AFFX-CreX-5_at 200710 P 5.16732e-05
AFFX-CreX-3_at 209866 P 4.42873e-05
AFFX-DapX-5_at 173.87 A 0.440646
AFFX-DapX-M_at 421.363 A 0.227636
AFFX-DapX-3_at 81.0342 A 0.645547
AFFX-LysX-5_at 51.4792 A 0.760937
AFFX-LysX-M_at 60.6359 A 0.876428
AFFX-LysX-3_at 260.169 A 0.185131
AFFX-PheX-5_at 58.4552 A 0.724854
AFFX-PheX-M_at 53.4254 A 0.897835
AFFX-PheX-3_at 129.506 A 0.737173
AFFX-ThrX-5_at 83.1611 A 0.824672
AFFX-ThrX-M_at 78.644 A 0.699394

Total number of rows: 45101

Table truncated, full table size 1363 Kbytes.




Supplementary file Size Download File type/resource
GSM206348.CEL.gz 3.6 Mb (ftp)(http) CEL
GSM206348.CHP.gz 241.2 Kb (ftp)(http) CHP
Processed data included within Sample table
Processed data provided as supplementary file

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