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GEO accession:
Sample GSM207641
Query DataSets for GSM207641
Status
Public on Nov 01, 2007
Title
Namalwa untreated (2)
Sample type
RNA
Source name
Cell line
Organism
Homo sapiens
Characteristics
Burkitt lymphoma
Biomaterial provider
DSMZ
Treatment protocol
untreated
Growth protocol
RPMI 1640 supplemented with 10% fetal bovine serum at 37°C and 5% CO2
Extracted molecule
total RNA
Extraction protocol
Qiagen
Label
Biotin
Label protocol
Affymetrix standard protocol
Hybridization protocol
Affymetrix standard protocol
Scan protocol
Affymetrix standard protocol
Description
no
Data processing
GCOS TGT=2000
Submission date
Jul 05, 2007
Last update date
Aug 14, 2011
Contact name
Anke Ehlers
E-mail(s)
[email protected]
Organization name
Charité Universitätsmedizin
Department
Institute of Pathology
Street address
Hindenburgdamm 30
City
Berlin
State/province
Berlin
ZIP/Postal code
12200
Country
Germany
Platform ID
GPL96
Series (1)
GSE8388
Epigenetic upregulation of B-cell inappropriate genes induces extinction of B-cell program in classical Hodgkin lymphoma
Relations
Reanalyzed by
GSM531255
Data table header descriptions
ID_REF
VALUE
signal intensity
ABS_CALL
detection yes or no
DETECTION P-VALUE
propability of obtaining a significant result
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
85.2464
P
0.0166701
AFFX-BioB-M_at
63.0098
P
0.000753643
AFFX-BioB-3_at
37.8157
A
0.0894781
AFFX-BioC-5_at
156.991
P
0.000509415
AFFX-BioC-3_at
94.7306
P
0.00159257
AFFX-BioDn-5_at
117.273
P
0.00110197
AFFX-BioDn-3_at
861.689
P
0.00110197
AFFX-CreX-5_at
1237.38
P
5.16732e-05
AFFX-CreX-3_at
1778
P
4.42873e-05
AFFX-DapX-5_at
10.4677
A
0.139482
AFFX-DapX-M_at
21.2154
A
0.102165
AFFX-DapX-3_at
2.50388
A
0.749204
AFFX-LysX-5_at
8.87165
A
0.340661
AFFX-LysX-M_at
3.23621
A
0.659339
AFFX-LysX-3_at
4.82101
A
0.574038
AFFX-PheX-5_at
3.02374
A
0.672921
AFFX-PheX-M_at
1.47235
A
0.672921
AFFX-PheX-3_at
6.07192
A
0.60308
AFFX-ThrX-5_at
9.51253
A
0.544587
AFFX-ThrX-M_at
9.61961
A
0.559354
Total number of rows:
22283
Table truncated, full table size
667 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM207641.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
GSM207641.CHP.gz
6.2 Mb
(ftp)
(http)
CHP
GSM207641.EXP.gz
319 b
(ftp)
(http)
EXP
Processed data included within Sample table
Processed data provided as supplementary file
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