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Sample GSM209697 Query DataSets for GSM209697
Status Public on Jan 18, 2008
Title IP control(2) duplicate
Sample type other
 
Source name Mock transfected HEK293 cells
Organism Homo sapiens
Characteristics Mock transfected HEK293 cells
Treatment protocol Cells extracts were immunoprecipitated with anti-HA antibody and co-IPed mRNAs were purified.
Growth protocol Human HEK293 cells were propagated in DMEM medium (GIBCO-BRL) containing 10% fetal bovine serum. 2 X 106 HEK293 cells were mock transfected.
Extracted molecule other
Extraction protocol TriZol reagent
Label Biotin
Label protocol Standard Affymetrix procedures
 
Hybridization protocol Standard Affymetrix procedures
Scan protocol Standard Affymetrix procedures
Description HEK293 cells were mock transfected .
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Jul 11, 2007
Last update date Aug 28, 2018
Contact name Luc DesGroseillers
E-mail(s) [email protected]
Organization name Université de Montréal
Department Biochimie
Street address 2900 Edouard Montpetit
City Montréal
State/province Québec
ZIP/Postal code H3T1J4
Country Canada
 
Platform ID GPL570
Series (1)
GSE8437 IP Staufen2
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 197.495 P 0.000169227
AFFX-BioB-M_at 289.861 P 4.42873e-05
AFFX-BioB-3_at 244.587 P 4.42873e-05
AFFX-BioC-5_at 660.896 P 4.42873e-05
AFFX-BioC-3_at 632.266 P 5.16732e-05
AFFX-BioDn-5_at 1630.84 P 4.42873e-05
AFFX-BioDn-3_at 2705.81 P 4.42873e-05
AFFX-CreX-5_at 6154.64 P 5.16732e-05
AFFX-CreX-3_at 7334.95 P 4.42873e-05
AFFX-DapX-5_at 21.624 P 0.00255552
AFFX-DapX-M_at 890.251 P 6.02111e-05
AFFX-DapX-3_at 1643.87 P 4.42873e-05
AFFX-LysX-5_at 6.15955 A 0.165861
AFFX-LysX-M_at 65.7835 P 0.000126798
AFFX-LysX-3_at 230.299 P 5.16732e-05
AFFX-PheX-5_at 10.6285 P 0.0365565
AFFX-PheX-M_at 64.8114 P 9.4506e-05
AFFX-PheX-3_at 235.647 P 4.42873e-05
AFFX-ThrX-5_at 12.3385 A 0.275146
AFFX-ThrX-M_at 47.8329 P 4.42246e-05

Total number of rows: 54675

Table truncated, full table size 1622 Kbytes.




Supplementary file Size Download File type/resource
GSM209697.CEL.gz 7.7 Mb (ftp)(http) CEL
GSM209697.CHP.gz 12.5 Mb (ftp)(http) CHP
GSM209697.EXP.gz 523 b (ftp)(http) EXP
Processed data included within Sample table
Processed data provided as supplementary file

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