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GEO accession:
Sample GSM21035
Query DataSets for GSM21035
Status
Public on May 02, 2004
Title
Operon agamous set4
Sample type
RNA
Channel 1
Source name
wild-type inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Channel 2
Source name
agamous inflorescences
Organism
Arabidopsis thaliana
Extracted molecule
total RNA
Description
Comparison of gene expression profiles of wild-type and agamous inflorescences.
The data were processed and normalized as described in Wellmer et al. (2004) Plant Cell 16(5).
Submission date
Apr 05, 2004
Last update date
May 27, 2005
Contact name
Frank Wellmer
E-mail(s)
[email protected]
Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL1077
Series (2)
GSE1274
Operon array expression profile agamous
GSE1275
Gene expression profiling of Arabidopsis floral homeotic mutants
Data table header descriptions
ID_REF
Intensity1
Absolute intensity measurement for the wild-type sample after background subtraction and normalization
Intensity2
Absolute intensity measurement for the mutant sample after background subtraction and normalization
P-value
Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE
log ratio (log2 of PRE_VALUE)
PRE_VALUE
Normalized signal intensity for the mutant sample divided by normalized signal intensity for the wild-type sample
Data table
ID_REF
Intensity1
Intensity2
P-value
VALUE
PRE_VALUE
A000001_01
2.70736
1.46087
0.38602
-0.8830503
0.54222
A000002_01
1.15629
1.1361
0.98019
-0.0184103
0.98732
A000003_01
1.00628
1.09441
0.90102
0.1281353
1.09288
A000004_01
1.66726
2.15567
0.59288
0.3776683
1.29924
A000005_01
1.1293
0.98239
0.79724
-0.1940643
0.87414
A000006_01
4.63968
3.78935
0.628
-0.2850733
0.8207
A000007_01
0.32265
0.21186
0.61984
-0.5998563
0.65982
A000008_01
0.01527
0.02132
0.88686
0.4882173
1.40271
A000009_01
0.03796
0.0411
0.88516
0.1218643
1.08814
A000010_01
0.36795
0.11434
0.0017
-1.6792273
0.31225
A000011_01
0.14517
0.21893
0.5171
0.5996803
1.51538
A000012_01
0.94359
1.15395
0.54794
0.2973563
1.22889
A000013_01
0.7081
0.81008
0.69246
0.2011193
1.14959
A000014_01
0.14089
0.15935
0.63636
0.1847123
1.13659
A000015_01
1.82448
1.67641
0.77278
-0.1150973
0.92332
A000016_01
1.32071
1.52695
0.58094
0.2163493
1.16179
A000017_01
2.47547
2.66811
0.86223
0.1151263
1.08307
A000018_01
0.02687
0.01856
0.4531
-0.5269093
0.69404
A000019_01
0.17109
0.07843
0.04206
-1.1182883
0.46064
A000020_01
0.76827
0.86166
0.70811
0.1725133
1.12702
Total number of rows:
26933
Table truncated, full table size
1379 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM21035.GPR.gz
1.9 Mb
(ftp)
(http)
GPR
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