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Sample GSM212611 Query DataSets for GSM212611
Status Public on Oct 23, 2007
Title classIIhiMECs B6aireWT rep1
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, B6aireWT
Organism Mus musculus
Characteristics Gender: male
Age: 3-4.5 weeks
Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, B6aireWT
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) [email protected]
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (2)
GSE8563 Lymphtoxin pathway effects on thymic medullary epithelial cells
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 250.372616822048
1415671_at 759.949097859937
1415672_at 2443.93512270387
1415673_at 173.95516820467
1415674_a_at 573.226859458452
1415675_at 283.435702940765
1415676_a_at 1157.51639094351
1415677_at 305.80367616469
1415678_at 1178.37423519795
1415679_at 3059.72241778684
1415680_at 235.299849830272
1415681_at 238.289315990324
1415682_at 210.358567915782
1415683_at 2665.82914423319
1415684_at 255.989825912822
1415685_at 247.019546442476
1415686_at 1721.30856791577
1415687_a_at 4087.80572516454
1415688_at 1335.04340548223
1415689_s_at 365.408711078011

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212611.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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