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Sample GSM212614 Query DataSets for GSM212614
Status Public on Oct 23, 2007
Title classIIhiMECs B6aireKO rep1
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, B6aireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, B6aireKO jos3387
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) [email protected]
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (2)
GSE8563 Lymphtoxin pathway effects on thymic medullary epithelial cells
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 224.370982829407
1415671_at 683.523071911676
1415672_at 2527.40204025345
1415673_at 153.649464714167
1415674_a_at 674.813580286151
1415675_at 279.908567915769
1415676_a_at 1028.43251721264
1415677_at 293.899889365939
1415678_at 1246.84203181264
1415679_at 2988.43995318864
1415680_at 224.082557007322
1415681_at 195.014513050539
1415682_at 207.865066431398
1415683_at 2892.02224450276
1415684_at 242.120423722689
1415685_at 307.348311429964
1415686_at 1880.90856791577
1415687_a_at 4610.89217712194
1415688_at 1604.6145059049
1415689_s_at 423.578288855136

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212614.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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