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Sample GSM212616 Query DataSets for GSM212616
Status Public on Oct 23, 2007
Title classIIhiMECs B6aireKO rep3
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, B6aireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, B6aireKO jos3484
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) [email protected]
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (2)
GSE8563 Lymphtoxin pathway effects on thymic medullary epithelial cells
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 524.808567915769
1415671_at 1022.93866488309
1415672_at 2550.20470897689
1415673_at 239.212351267593
1415674_a_at 805.463258218763
1415675_at 454.351406079885
1415676_a_at 1636.74940369609
1415677_at 731.143639740293
1415678_at 1629.45530149215
1415679_at 2729.55763537147
1415680_at 357.156329754377
1415681_at 202.639452662483
1415682_at 219.05856791577
1415683_at 2913.70856791577
1415684_at 296.908567915769
1415685_at 458.408567915769
1415686_at 2145.4125691405
1415687_a_at 5820.95239205419
1415688_at 1416.3124188128
1415689_s_at 599.245940711534

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212616.CEL.gz 4.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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