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Sample GSM212633 Query DataSets for GSM212633
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireKO rep1
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireKO jos3128
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) [email protected]
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 238.174920938445
1415671_at 777.542893234921
1415672_at 3009.18678877804
1415673_at 279.136909823509
1415674_a_at 633.892789816403
1415675_at 440.078349102158
1415676_a_at 1726.00856791577
1415677_at 368.563135126164
1415678_at 918.768640197696
1415679_at 2937.306506426
1415680_at 235.282256176145
1415681_at 254.6135282754
1415682_at 164.183284973696
1415683_at 2805.51013512056
1415684_at 265.784600181105
1415685_at 211.131427840276
1415686_at 2532.04065871877
1415687_a_at 4391.29760353379
1415688_at 1812.35856791577
1415689_s_at 512.588980230444

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212633.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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