NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM212636 Query DataSets for GSM212636
Status Public on Jul 22, 2008
Title classIIhiMECs BALBaireKO rep4
Sample type RNA
 
Source name MHC class II high thymic medullary epithelial cells, BALBaireKO
Organism Mus musculus
Characteristics Gender: male Age: 3-4.5 weeks Isolation: FACS of CD45-G8.8+Ly51intclassIIhi TECs Strain: BALB/c
Extracted molecule total RNA
Extraction protocol RNA isolated with Trizol reagent and amplified twice with the MessageAmp aRNA Kit (Ambion)
Label Biotin
Label protocol BioArray High Yield RNA Transcript Labeling T7 Kit (Enzo Life Sciences)
 
Hybridization protocol standard Affymetrix protocol
Scan protocol standard Affymetrix protocol
Description MHC class II high thymic medullary epithelial cells, BALBaireKO jos3383
Data processing RMA
 
Submission date Jul 23, 2007
Last update date Aug 28, 2018
Contact name CBDM Lab
E-mail(s) [email protected]
Phone 617-432-7747
Organization name Harvard Medical School
Department Microbiology and Immunobiology
Lab CBDM
Street address 77 Avenue Louis Pasteur
City Boston
State/province MA
ZIP/Postal code 02215
Country USA
 
Platform ID GPL1261
Series (1)
GSE8564 Analysis of Aire effects on individual mice of different genetic backgrounds
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE RMA signal

Data table
ID_REF VALUE
1415670_at 298.772473719215
1415671_at 878.988533511487
1415672_at 2852.01665077001
1415673_at 232.150399970075
1415674_a_at 596.021090344594
1415675_at 274.058080018382
1415676_a_at 1906.45021454242
1415677_at 391.069320974399
1415678_at 1429.44855751471
1415679_at 3040.85611475581
1415680_at 237.430912008733
1415681_at 217.281270462693
1415682_at 208.956706152282
1415683_at 2666.99761004282
1415684_at 341.398593345637
1415685_at 321.572445005496
1415686_at 2343.22905780892
1415687_a_at 7923.11107809708
1415688_at 1937.6108413385
1415689_s_at 492.718131006334

Total number of rows: 45101

Table truncated, full table size 1245 Kbytes.




Supplementary file Size Download File type/resource
GSM212636.CEL.gz 3.6 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap