|
| Status |
Public on Feb 11, 2017 |
| Title |
Ulcerative colitis 6 |
| Sample type |
genomic |
| |
|
| Source name |
Ulcerative colitis
|
| Organism |
Homo sapiens |
| Characteristics |
disease state: Ulcerative colitis
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purified from the samples by Macrogen inc. according to standard instructions
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
UC6
|
| Data processing |
BeadStudio software v3.2
The non_normalized.txt contains unmethylated and methylated signal intensities.
|
| |
|
| Submission date |
May 06, 2016 |
| Last update date |
Feb 11, 2017 |
| Contact name |
Keunsoo Kang |
| E-mail(s) |
[email protected]
|
| Organization name |
Dankook University
|
| Street address |
119 Dandae-ro
|
| City |
Cheonan |
| ZIP/Postal code |
31119 |
| Country |
South Korea |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE81211 |
Genome-wide methylation approach identifies a novel hypermethylated gene panel in ulcerative colitis |
|
