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Status
Public on Apr 16, 2004
Title
MCF7_U133_AdCont1
Sample type
RNA
Source name
MCF7 breast cancer cells
Organism
Homo sapiens
Extracted molecule
total RNA
Description
MCF7 cells were infected with adenovirus expressing Green Fluorescent protein. After 16 hours, RNA was extracted using a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. Initial data analysis was performed using Affymetrix MAS software. Keywords = human, MCF7 cells, breast cancer, Myb oncogene
Submission date
Apr 13, 2004
Last update date
May 27, 2005
Contact name
Scott A. Ness
E-mail(s)
[email protected]
Phone
505-272-9883
Organization name
U. of New Mexico HSC
Department
Internal Medicine
Lab
Ness
Street address
MSC07 4025 - CRF 121
City
Albuquerque
State/province
NM
ZIP/Postal code
87131-0001
Country
USA
Platform ID
GPL96
Series (1)
GSE1318
Myb specificity determinants
Data table header descriptions
ID_REF
VALUE
'signal' a measure of the abundance of a transcript
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
2560.7
P
AFFX-BioB-M_at
5244.3
P
AFFX-BioB-3_at
3227.1
P
AFFX-BioC-5_at
6784.5
P
AFFX-BioC-3_at
5741.8
P
AFFX-BioDn-5_at
6023.1
P
AFFX-BioDn-3_at
35323.8
P
AFFX-CreX-5_at
65170
P
AFFX-CreX-3_at
96298.5
P
AFFX-DapX-5_at
4.8
A
AFFX-DapX-M_at
37
A
AFFX-DapX-3_at
20.5
A
AFFX-LysX-5_at
9.3
A
AFFX-LysX-M_at
19.5
A
AFFX-LysX-3_at
54.2
A
AFFX-PheX-5_at
4.9
A
AFFX-PheX-M_at
14.5
A
AFFX-PheX-3_at
272.1
A
AFFX-ThrX-5_at
28.9
A
AFFX-ThrX-M_at
100.1
A
Total number of rows: 22283 Table truncated, full table size 403 Kbytes .Supplementary file
Size
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File type/resource
GSM21629.CEL.gz
3.1 Mb
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CEL