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Status
Public on Apr 16, 2004
Title
MCF7_U133_AHC1
Sample type
RNA
Source name
MCF7 breast cancer cells
Organism
Homo sapiens Extracted molecule
total RNA
Description
MCF7 cells were infected with adenovirus expressing Green Fluorescent protein and AHC, a recombinant protein with the DNA binding domain of A-Myb and the transactivation domain of c-Myb. After 16 hours, RNA was extracted using a Quiagen RNeasy kit. Targets were produced using standard Affymetrix procedures from about 5ug of total RNA. Initial data analysis was performed using Affymetrix MAS software.
Submission date
Apr 13, 2004
Last update date
May 27, 2005
Contact name
Scott A. Ness
E-mail(s)
[email protected] Phone
505-272-9883
Organization name
U. of New Mexico HSC
Department
Internal Medicine
Lab
Ness
Street address
MSC07 4025 - CRF 121
City
Albuquerque
State/province
NM
ZIP/Postal code
87131-0001
Country
USA
Platform ID
GPL96 Series (1)
GSE1318 Myb specificity determinants
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
Data table ID_REF VALUE ABS_CALL AFFX-BioB-5_at
2396.6
P
AFFX-BioB-M_at
3825.1
P
AFFX-BioB-3_at
2212.8
P
AFFX-BioC-5_at
5174
P
AFFX-BioC-3_at
4402.7
P
AFFX-BioDn-5_at
3989.1
P
AFFX-BioDn-3_at
23333.5
P
AFFX-CreX-5_at
41803.8
P
AFFX-CreX-3_at
63928.3
P
AFFX-DapX-5_at
88.4
A
AFFX-DapX-M_at
122.9
A
AFFX-DapX-3_at
7.6
A
AFFX-LysX-5_at
52.9
A
AFFX-LysX-M_at
27.2
A
AFFX-LysX-3_at
13
A
AFFX-PheX-5_at
7.9
A
AFFX-PheX-M_at
11.2
A
AFFX-PheX-3_at
141.2
A
AFFX-ThrX-5_at
71.4
A
AFFX-ThrX-M_at
56.8
A
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