|
| Status |
Public on May 18, 2019 |
| Title |
iPS cells from male proband with ASD, line 2.22 |
| Sample type |
genomic |
| |
|
| Source name |
iPS cell line 004-2.22
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: iPS cells
gender: male
diagnosis: ASD
|
| Growth protocol |
iPS cells were grown in mTeSR1 medium on matrigel-coated plates
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
Qiagen DNeasy blood and tissue kit
|
| Label |
biotin
|
| Label protocol |
Labelling was performed by staff at The Centre for Applied Genomics at The Hospital for Sick Children
|
| |
|
| Hybridization protocol |
Hybridization was performed by staff at The Centre for Applied Genomics at The Hospital for Sick Children
|
| Scan protocol |
Scanning was performed by staff at The Centre for Applied Genomics at The Hospital for Sick Children
|
| Description |
Hybridized to CytoScanHD
|
| Data processing |
The data was processed using Affymetrix Chromosome Analysis Suite (ChAS) version 3.1.0.15 (r9069)
.cychp files contain genome wide copy number data; thresholds for duplications and deletions: 10 kb or greater, containing at least 10 probes
|
| |
|
| Submission date |
Jun 07, 2016 |
| Last update date |
May 18, 2019 |
| Contact name |
James Ellis |
| E-mail(s) |
[email protected]
|
| Organization name |
The Hospital for Sick Children
|
| Department |
Developmental & Stem Cell Biology
|
| Street address |
686 Bay St
|
| City |
Toronto |
| State/province |
ON |
| ZIP/Postal code |
M5G 0A4 |
| Country |
Canada |
| |
|
| Platform ID |
GPL16131 |
| Series (1) |
| GSE83089 |
Copy number variation data from iPS cells with PTCHD1-AS deletions |
|
