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Sample GSM2200284 Query DataSets for GSM2200284
Status Public on May 15, 2019
Title N243Quit_24wk
Sample type RNA
 
Source name Nasal Epithelium
Organism Homo sapiens
Characteristics tissue: nasal epithelium
patient id: N243
time in weeks: 24
rna integrity number (rin): 4.3
age: 64
gender: F
Extracted molecule total RNA
Extraction protocol RNA was extracted from the cells using miRNeasy mini kit (Qiagen) according to manufacturer's protocol
Label Biotin
Label protocol Affymetrix Suggest Protocol
 
Hybridization protocol Affymetrix Suggest Protocol
Scan protocol Affymetrix Suggest Protocol
Description RNA was extracted from the cells using miRNeasy mini kit (Qiagen) according to manufacturer's protocol
Data processing RMA generated expression value using affy library in R using the custom CDF HuGene10stv1_Hs_ENTREZG_14.1.0 from brainarray.
 
Submission date Jun 14, 2016
Last update date May 15, 2019
Contact name Kahkeshan Hijazi
E-mail(s) [email protected]
Phone +16173099896
Organization name Boston University
Lab Computational Biomedicine
Street address 715 Albany Street
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL15034
Series (1)
GSE83364 Tobacco-related alterations in airway gene expression are rapidly reversed within weeks following smoking cessation

Data table header descriptions
ID_REF
VALUE The data is RMA normalized using justRMA. The resultant table is on a log2 scale

Data table
ID_REF VALUE
1_at 7.038235111
10_at 3.913570404
100_at 5.237122842
1000_at 5.026941467
10000_at 4.56993861
100009676_at 5.865434648
10001_at 5.224878253
10002_at 5.434114421
10003_at 3.41459473
100033413_at 2.533796792
100033414_at 5.547913817
100033416_at 3.562233286
100033418_at 3.19630099
100033420_at 4.545035784
100033422_at 2.615883053
100033423_at 3.494457232
100033424_at 2.511886508
100033425_at 2.285522556
100033426_at 6.652052248
100033427_at 9.447417342

Total number of rows: 19741

Table truncated, full table size 401 Kbytes.




Supplementary file Size Download File type/resource
GSM2200284_AS_B2_14927.CEL.gz 3.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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